Afnan Shakoori, Zain Alhindi, Mohammad Alobaidy, Amna Moulana, Ayman Qashgari, Rehab M Bagadood, Ghadir Sindi, Banan Atwah, Anmar Anwar Khan
{"title":"Intercalating compounds alongside DNA helicase Q1 Plasmodium falciparum 3D7: Assessments of pharmacokinetic properties prediction of ADME.","authors":"Afnan Shakoori, Zain Alhindi, Mohammad Alobaidy, Amna Moulana, Ayman Qashgari, Rehab M Bagadood, Ghadir Sindi, Banan Atwah, Anmar Anwar Khan","doi":"10.4103/jvbd.jvbd_65_24","DOIUrl":null,"url":null,"abstract":"<p><strong>Background objectives: </strong>Quantum chemical and molecular docking practices deliver new perceptions into how etoposide, novobiocin, nogalamycin and netropsin interact with the biological targets PF3D7_0918600 ( Plasmodium falciparum 3D7). Further, pharmacokinetics of a drug candidate which is influenced by a variety of factors, including P-glycoprotein (Pgp) transport, PBB (Plasma protein binding), and BBB (Blood-brain barrier) permeation, help to forecast the pharmacological characteristics of acetyl-CoA reductase inhibitors (ADMEs) and their metabolites.</p><p><strong>Methods: </strong>We have elevated four compounds, etoposide, novobiocin, nogalamycin and netropsin. We have studied molecular docking against target protein of Plasmodium falciparum (PF3D7_0918600) through AutoDock Vina platform and AutoDock-Tools (ADT) and pharmacokinetic properties were carried out using ADMET 2.0.</p><p><strong>Results: </strong>The relative results of molecular docking recommended a greater binding affinity of novobiocin with the selected receptors among other compounds. In silico ADME screening is a computational approach utilised to forecast the pharmacological characteristics of acetyl-CoA reductase inhibitors (ADMEs) and their metabolites.</p><p><strong>Interpretation conclusion: </strong>The ADMEs are based on adsorption-desorption kinetics and pharmacopoeia. Adsorption and distribution analysis is used to assess the potential of a drug candidate. In vitro ADME is exploited to expect the effect of Pgp transport on the drug candidates. ADME has been used to predict CYP1A2 inhibitors and to predict PPB and BBB penetration. This work summarizes the current knowledge on molecular docking, ADME and identifies potential drug candidates for ADME in vitro and in vivo .</p>","PeriodicalId":17660,"journal":{"name":"Journal of Vector Borne Diseases","volume":" ","pages":"295-302"},"PeriodicalIF":1.2000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Vector Borne Diseases","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.4103/jvbd.jvbd_65_24","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/10/5 0:00:00","PubModel":"Epub","JCR":"Q4","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0
Abstract
Background objectives: Quantum chemical and molecular docking practices deliver new perceptions into how etoposide, novobiocin, nogalamycin and netropsin interact with the biological targets PF3D7_0918600 ( Plasmodium falciparum 3D7). Further, pharmacokinetics of a drug candidate which is influenced by a variety of factors, including P-glycoprotein (Pgp) transport, PBB (Plasma protein binding), and BBB (Blood-brain barrier) permeation, help to forecast the pharmacological characteristics of acetyl-CoA reductase inhibitors (ADMEs) and their metabolites.
Methods: We have elevated four compounds, etoposide, novobiocin, nogalamycin and netropsin. We have studied molecular docking against target protein of Plasmodium falciparum (PF3D7_0918600) through AutoDock Vina platform and AutoDock-Tools (ADT) and pharmacokinetic properties were carried out using ADMET 2.0.
Results: The relative results of molecular docking recommended a greater binding affinity of novobiocin with the selected receptors among other compounds. In silico ADME screening is a computational approach utilised to forecast the pharmacological characteristics of acetyl-CoA reductase inhibitors (ADMEs) and their metabolites.
Interpretation conclusion: The ADMEs are based on adsorption-desorption kinetics and pharmacopoeia. Adsorption and distribution analysis is used to assess the potential of a drug candidate. In vitro ADME is exploited to expect the effect of Pgp transport on the drug candidates. ADME has been used to predict CYP1A2 inhibitors and to predict PPB and BBB penetration. This work summarizes the current knowledge on molecular docking, ADME and identifies potential drug candidates for ADME in vitro and in vivo .
期刊介绍:
National Institute of Malaria Research on behalf of Indian Council of Medical Research (ICMR) publishes the Journal of Vector Borne Diseases. This Journal was earlier published as the Indian Journal of Malariology, a peer reviewed and open access biomedical journal in the field of vector borne diseases. The Journal publishes review articles, original research articles, short research communications, case reports of prime importance, letters to the editor in the field of vector borne diseases and their control.