Neurosimilator for Undergraduate Biophysics and Neurophysiology Courses.

Freddy Dupuis, Vadim Shlyonsky, Bertrand de Prelle, David Gall
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Abstract

Stringent animal welfare principles are forcing undergraduate instructors to avoid the use of animals. Therefore, many hands-on lab sessions using laboratory animals are progressively replaced by computer simulations. These versatile software simulations permit the observation of the behavior of biological systems under a great variety of experimental conditions. While this versatility is important, computer simulations often work even when a student makes wrong assumptions, a situation that poses its own pedagogical problem. Hands-on learning provides pupils with the opportunity to safely make mistakes and learn organically through trial and error and should therefore still be promoted. We propose an electronic model of an excitable cell composed of different modules representing different parts of a neuron - dendrites, soma, axon and node of Ranvier. We describe a series of experiments that allow students to better understand differences between passive and active cell responses and differences between myelinated and demyelinated axons. These circuits can also be used to demonstrate temporal and spatial summation of signals coming to the neuron via dendrites, as well as the neuron coding by firing frequency. Finally, they permit experimental determination along with theoretical calculations of important biophysical properties of excitable cells, such as rheobase, chronaxie and space constant. This open-source model has been successfully integrated into an undergraduate course of the physiology of excitable cells and student feedback assessment reveals that it helped students to understand important notions of the course. Thus, this neuromorphic circuit could be a valuable tool for biophysics and neuroscience courses in other universities.

用于生物物理学和神经生理学本科课程的神经模拟器。
严格的动物福利原则迫使本科生导师避免使用动物。因此,许多使用实验动物的动手实验课逐渐被计算机模拟所取代。这些多功能的模拟软件可以在多种实验条件下观察生物系统的行为。这种多功能性固然重要,但计算机模拟往往在学生作出错误假设时仍能发挥作用,这种情况本身就带来了教学问题。实践学习为学生提供了安全地犯错误和通过尝试和错误进行有机学习的机会,因此仍应加以推广。我们提出了一个由不同模块组成的可兴奋细胞电子模型,这些模块代表了神经元的不同部分--树突、体、轴突和兰维耶结。我们描述了一系列实验,让学生更好地理解被动和主动细胞反应之间的差异,以及髓鞘轴突和脱髓鞘轴突之间的差异。这些电路还可用于演示通过树突到达神经元的信号的时间和空间总和,以及神经元通过发射频率进行编码。最后,这些模型还能通过实验和理论计算确定可兴奋细胞的重要生物物理特性,如流变基、时序和空间常数。这一开源模型已成功融入一门关于可兴奋细胞生理学的本科课程,学生的反馈评估显示,它有助于学生理解课程的重要概念。因此,这个神经形态电路可以成为其他大学生物物理学和神经科学课程的宝贵工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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