Deep Learning and Automatic Differentiation of Pancreatic Lesions in Endoscopic Ultrasound: A Transatlantic Study.

IF 3 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY
Miguel Mascarenhas Saraiva, Mariano González-Haba, Jessica Widmer, Francisco Mendes, Tamas Gonda, Belen Agudo, Tiago Ribeiro, António Costa, Yousef Fazel, Marcos Eduardo Lera, Eduardo Horneaux de Moura, Matheus Ferreira de Carvalho, Alexandre Bestetti, João Afonso, Miguel Martins, Maria João Almeida, Filipe Vilas-Boas, Pedro Moutinho-Ribeiro, Susana Lopes, Joana Fernandes, João Ferreira, Guilherme Macedo
{"title":"Deep Learning and Automatic Differentiation of Pancreatic Lesions in Endoscopic Ultrasound: A Transatlantic Study.","authors":"Miguel Mascarenhas Saraiva, Mariano González-Haba, Jessica Widmer, Francisco Mendes, Tamas Gonda, Belen Agudo, Tiago Ribeiro, António Costa, Yousef Fazel, Marcos Eduardo Lera, Eduardo Horneaux de Moura, Matheus Ferreira de Carvalho, Alexandre Bestetti, João Afonso, Miguel Martins, Maria João Almeida, Filipe Vilas-Boas, Pedro Moutinho-Ribeiro, Susana Lopes, Joana Fernandes, João Ferreira, Guilherme Macedo","doi":"10.14309/ctg.0000000000000771","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Endoscopic ultrasound (EUS) allows for characterization and biopsy of pancreatic lesions. Pancreatic cystic neoplasms (PCN) include mucinous (M-PCN) and nonmucinous lesions (NM-PCN). Pancreatic ductal adenocarcinoma (P-DAC) is the commonest pancreatic solid lesion (PSL), followed by pancreatic neuroendocrine tumor (P-NET). Although EUS is preferred for pancreatic lesion evaluation, its diagnostic accuracy is suboptimal. This multicentric study aims to develop a convolutional neural network (CNN) for detecting and distinguishing PCN (namely M-PCN and NM-PCN) and PSL (particularly P-DAC and P-NET).</p><p><strong>Methods: </strong>A CNN was developed with 378 EUS examinations from 4 international reference centers (Centro Hospitalar Universitário São João, Hospital Universitario Puerta de Hierro Majadahonda, New York University Hospitals, Hospital das Clínicas Faculdade de Medicina da Universidade de São Paulo). About 126.000 images were obtained-19.528 M-PCN, 8.175 NM-PCN, 64.286 P-DAC, 29.153 P-NET, and 4.858 normal pancreas images. A trinary CNN differentiated normal pancreas tissue from M-PCN and NM-PCN. A binary CNN distinguished P-DAC from P-NET. The total data set was divided into a training and testing data set (used for model's evaluation) in a 90/10% ratio. The model was evaluated through its sensitivity, specificity, positive and negative predictive values, and accuracy.</p><p><strong>Results: </strong>The CNN had 99.1% accuracy for identifying normal pancreatic tissue, 99.0% and 99.8% for M-PCN and NM-PCN, respectively. P-DAC and P-NET were distinguished with 94.0% accuracy.</p><p><strong>Discussion: </strong>Our group developed the first worldwide CNN capable of detecting and differentiating the commonest PCN and PSL in EUS images, using examinations from 4 centers in 2 continents, minimizing the impact of the demographic bias. Larger multicentric studies are needed for technology implementation.</p>","PeriodicalId":10278,"journal":{"name":"Clinical and Translational Gastroenterology","volume":" ","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Clinical and Translational Gastroenterology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.14309/ctg.0000000000000771","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"GASTROENTEROLOGY & HEPATOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Introduction: Endoscopic ultrasound (EUS) allows for characterization and biopsy of pancreatic lesions. Pancreatic cystic neoplasms (PCN) include mucinous (M-PCN) and nonmucinous lesions (NM-PCN). Pancreatic ductal adenocarcinoma (P-DAC) is the commonest pancreatic solid lesion (PSL), followed by pancreatic neuroendocrine tumor (P-NET). Although EUS is preferred for pancreatic lesion evaluation, its diagnostic accuracy is suboptimal. This multicentric study aims to develop a convolutional neural network (CNN) for detecting and distinguishing PCN (namely M-PCN and NM-PCN) and PSL (particularly P-DAC and P-NET).

Methods: A CNN was developed with 378 EUS examinations from 4 international reference centers (Centro Hospitalar Universitário São João, Hospital Universitario Puerta de Hierro Majadahonda, New York University Hospitals, Hospital das Clínicas Faculdade de Medicina da Universidade de São Paulo). About 126.000 images were obtained-19.528 M-PCN, 8.175 NM-PCN, 64.286 P-DAC, 29.153 P-NET, and 4.858 normal pancreas images. A trinary CNN differentiated normal pancreas tissue from M-PCN and NM-PCN. A binary CNN distinguished P-DAC from P-NET. The total data set was divided into a training and testing data set (used for model's evaluation) in a 90/10% ratio. The model was evaluated through its sensitivity, specificity, positive and negative predictive values, and accuracy.

Results: The CNN had 99.1% accuracy for identifying normal pancreatic tissue, 99.0% and 99.8% for M-PCN and NM-PCN, respectively. P-DAC and P-NET were distinguished with 94.0% accuracy.

Discussion: Our group developed the first worldwide CNN capable of detecting and differentiating the commonest PCN and PSL in EUS images, using examinations from 4 centers in 2 continents, minimizing the impact of the demographic bias. Larger multicentric studies are needed for technology implementation.

深度学习与内窥镜超声波胰腺病变的自动分辨--一项跨大西洋研究。
内窥镜超声(EUS)可对胰腺病变进行定性和活检。胰腺囊性肿瘤(PCN)包括粘液性病变(M-PCN)和非粘液性病变(NM-PCN)。胰腺导管腺癌(P-DAC)是最常见的胰腺实体瘤(PSL),其次是胰腺神经内分泌肿瘤(P-NET)。虽然 EUS 是评估胰腺病变的首选方法,但其诊断准确性并不理想。这项多中心研究旨在开发一种卷积神经网络(CNN),用于检测和区分 PCN(即 M-PCN 和 NM-PCN)和 PSL(尤其是 P-DAC 和 P-NET)。利用 4 个国际参考中心(圣若昂大学中心医院、普埃尔塔德埃罗马亚达洪达大学医院、纽约大学医院、FMUSP Clínicas 医院)的 378 例 EUS 检查结果开发了 CNN。共获得 126.000 张图像--19.528 张 M-PCN、8.175 张 NM-PCN、64.286 张 P-DAC、29.153 张 P-NET 和 4.858 张正常胰腺图像。三元 CNN 将正常胰腺组织与 M-PCN 和 NM-PCN 区分开来。二元 CNN 将 P-DAC 与 P-NET 区分开来。整个数据集按 90/10% 的比例分为训练数据集和测试数据集(用于模型评估)。通过灵敏度、特异性、阳性和阴性预测值以及准确度对模型进行评估。CNN 识别正常胰腺组织的准确率为 99.1%,识别 M-PCN 和 NM-PCN 的准确率分别为 99.0% 和 99.8%。区分 P-DAC 和 P-NET 的准确率为 94.0%。我们的研究小组利用来自两大洲 4 个中心的检查结果,开发出了全球首个能够检测和区分 EUS 图像中最常见的 PCN 和 PSL 的 CNN,最大程度地减少了人口统计学偏差的影响。该技术的实施需要更大规模的多中心研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Clinical and Translational Gastroenterology
Clinical and Translational Gastroenterology GASTROENTEROLOGY & HEPATOLOGY-
CiteScore
7.00
自引率
0.00%
发文量
114
审稿时长
16 weeks
期刊介绍: Clinical and Translational Gastroenterology (CTG), published on behalf of the American College of Gastroenterology (ACG), is a peer-reviewed open access online journal dedicated to innovative clinical work in the field of gastroenterology and hepatology. CTG hopes to fulfill an unmet need for clinicians and scientists by welcoming novel cohort studies, early-phase clinical trials, qualitative and quantitative epidemiologic research, hypothesis-generating research, studies of novel mechanisms and methodologies including public health interventions, and integration of approaches across organs and disciplines. CTG also welcomes hypothesis-generating small studies, methods papers, and translational research with clear applications to human physiology or disease. Colon and small bowel Endoscopy and novel diagnostics Esophagus Functional GI disorders Immunology of the GI tract Microbiology of the GI tract Inflammatory bowel disease Pancreas and biliary tract Liver Pathology Pediatrics Preventative medicine Nutrition/obesity Stomach.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信