Development and Validation of a Prognostic Clinical Risk Score for Subsequent Atopic Dermatitis Risk

IF 5.2 2区 医学 Q1 ALLERGY
Tamar Landau, Keren Gamrasni, Alex Levin, Yotam Barlev, Oliver Sanders, Shira Benor, Michael Brandwein
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A prognostic AD clinical risk score can empower clinicians to diagnose AD earlier on. It can also be employed by the clinical trialist to enrich birth cohorts with a priori screening for at-risk patients. We aimed to develop a clinical risk score using information available in the prenatal period, with consideration to explainability and applicability, and validate it on an external, geographically independent dataset.</p><p>The training dataset included the electronic medical records (EMR) of all infant-mother dyads captured in the Leumit Health Services (Leumit) EMR between 2010 and 2019 with a recorded AD diagnosis before the age of three (<i>n</i> = 7370) and a random sample of infant-mother dyads selected from the Leumit EMR whereby AD was not diagnosed in the child's EMR (<i>n</i> = 63,852). Leumit is one of four national health providers and its EMR captures routine data from all medical consultations, procedures, and prescriptions, along with relevant sociodemographic data. The US-based Infant Feeding Practices Study 2 (IFPS2) was used as a validation dataset [<span>7</span>]. The cohort included a nationally distributed panel of 1807 infants born between 2005 and 2007, of which 389 (21.5%) reported a doctor's diagnosis of AD by the age of one. Additional information about study methods and findings are available in the online repository (https://github.com/tami-myor/AD-Score/tree/main).</p><p>The scoring method is designed to generate a value from 0 to 1, representing the probable risk in probabilistic terms, and can be effectively calculated if some variables are missing. Patients were divided into high (&gt; 0.5), medium (0.35–0.5) and low-risk groups (&lt; 0.35) There was a significant difference in means among the risk groups in relation to the actual cases of atopic dermatitis (ANOVA, <i>p</i> &lt; 0.001) for both train and validation set. When compared to the SOC, individuals in the low-risk group were less likely to develop AD than those without a parental history of atopy and individuals in the high-risk group were more likely to develop AD than those with a parental history of atopy for both train and validation set. The OR in a univariate logistic regression model for developing AD was 2.30 (CI 2.15–2.46, <i>p</i> &lt; 0.001) for the medium-risk group and 4.06 (CI 3.80–4.34, <i>p</i> &lt; 0.001) for the high-risk group when compared with the low-risk group in the training dataset. Separately, the OR for developing AD was 1.74 (CI 1.34–2.27, <i>p</i> &lt; 0.001) for the medium-risk group and 3.36 (CI 2.51–4.49, <i>p</i> &lt; 0.001) for the high-risk group when compared with the low-risk group in the validation dataset. These high-risk ORs are more than double the OR of the SOC parental history of atopy calculated in the original multivariate model (OR 1.57, CI 1.43–1.72, <i>p</i> &lt; 0.001) and demonstrate the utility of this method over the current SOC.</p><p>This prognostic AD risk assessment model harnesses known environmental and familial associations into a quantifiable and applicable clinical tool. It holds the potential to inform clinicians and caregivers as to an infant's risk of developing AD thereby influencing the continuum of care, enabling earlier diagnosis, and targeting patients to adopt preventive measures for other atopic conditions. Furthermore, it can reduce cohort sizes for AD-prevention clinical trials. While developed on epidemiological data from an EMR, the validation study showed its applicability on a geographically distinct survey-based cohort, thereby opening the door to deployment in a variety of settings. 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引用次数: 0

Abstract

Atopic dermatitis (AD), is a common, complex and heterogeneous inflammatory skin disease [1]. Many patients develop AD by 5 years, directly affecting quality of life [2], and increasing risk for other comorbidities, including asthma, allergic rhinitis, and food allergies [3]. Filaggrin mutations and family history of atopy are important risk factors for AD development [1, 4]. Each provides poor predictive value when used independently to stratify risk, yet family history of atopy has been used in the research setting [5, 6] and is the current standard of care (SOC). A prognostic AD clinical risk score can empower clinicians to diagnose AD earlier on. It can also be employed by the clinical trialist to enrich birth cohorts with a priori screening for at-risk patients. We aimed to develop a clinical risk score using information available in the prenatal period, with consideration to explainability and applicability, and validate it on an external, geographically independent dataset.

The training dataset included the electronic medical records (EMR) of all infant-mother dyads captured in the Leumit Health Services (Leumit) EMR between 2010 and 2019 with a recorded AD diagnosis before the age of three (n = 7370) and a random sample of infant-mother dyads selected from the Leumit EMR whereby AD was not diagnosed in the child's EMR (n = 63,852). Leumit is one of four national health providers and its EMR captures routine data from all medical consultations, procedures, and prescriptions, along with relevant sociodemographic data. The US-based Infant Feeding Practices Study 2 (IFPS2) was used as a validation dataset [7]. The cohort included a nationally distributed panel of 1807 infants born between 2005 and 2007, of which 389 (21.5%) reported a doctor's diagnosis of AD by the age of one. Additional information about study methods and findings are available in the online repository (https://github.com/tami-myor/AD-Score/tree/main).

The scoring method is designed to generate a value from 0 to 1, representing the probable risk in probabilistic terms, and can be effectively calculated if some variables are missing. Patients were divided into high (> 0.5), medium (0.35–0.5) and low-risk groups (< 0.35) There was a significant difference in means among the risk groups in relation to the actual cases of atopic dermatitis (ANOVA, p < 0.001) for both train and validation set. When compared to the SOC, individuals in the low-risk group were less likely to develop AD than those without a parental history of atopy and individuals in the high-risk group were more likely to develop AD than those with a parental history of atopy for both train and validation set. The OR in a univariate logistic regression model for developing AD was 2.30 (CI 2.15–2.46, p < 0.001) for the medium-risk group and 4.06 (CI 3.80–4.34, p < 0.001) for the high-risk group when compared with the low-risk group in the training dataset. Separately, the OR for developing AD was 1.74 (CI 1.34–2.27, p < 0.001) for the medium-risk group and 3.36 (CI 2.51–4.49, p < 0.001) for the high-risk group when compared with the low-risk group in the validation dataset. These high-risk ORs are more than double the OR of the SOC parental history of atopy calculated in the original multivariate model (OR 1.57, CI 1.43–1.72, p < 0.001) and demonstrate the utility of this method over the current SOC.

This prognostic AD risk assessment model harnesses known environmental and familial associations into a quantifiable and applicable clinical tool. It holds the potential to inform clinicians and caregivers as to an infant's risk of developing AD thereby influencing the continuum of care, enabling earlier diagnosis, and targeting patients to adopt preventive measures for other atopic conditions. Furthermore, it can reduce cohort sizes for AD-prevention clinical trials. While developed on epidemiological data from an EMR, the validation study showed its applicability on a geographically distinct survey-based cohort, thereby opening the door to deployment in a variety of settings. An important limitation in the validation dataset is its inclusion of diagnoses until 1 year of age, as opposed to 3 years of age in the development dataset. Undoubtedly, the inclusion of genetic information would further buttress the predictive capability of the model. Future studies can further this approach by incorporating additional documented risk factors and by exploring the utility of this approach for other conditions associated with the atopic march.

Tamar Landau: data curation (supporting), formal analysis (lead), investigation (supporting), writing – review & editing (equal). Keren Gamrasni: project administration (supporting), investigation (supporting), writing – review & editing (equal). Alex Levin: project administration (supporting), investigation (supporting), writing – review & editing (equal). Yotam Barlev: project administration (supporting), investigation (supporting), writing – review & editing (equal). Oliver Sanders: resources (equal), supervision (equal), investigation (supporting), writing – review & editing (equal). Shira Benor: resources (equal), supervision (equal), investigation (supporting), writing – review & editing (equal). Michael Brandwein: conceptualization (lead), data curation (supporting), formal analysis (supporting), investigation (lead), project administration (supporting), writing – original draft preparation (lead).

This study was performed according to the approved protocols and procedures received from the Helsinki Committee of Leumit Healthcare Services, Israel (October 2022, approval number 0026-22-LEU). A written informed consent waiver was obtained by the Helsinki committee based on the nature of the study, specifically the use of deidentified and previously collected data.

Tamar Landau, Keren Gamrasni, Alex Levin, Yotam Barlev and Michael Brandwein report personal fees from MYOR Diagnostics Ltd., during the conduct of the study. MYOR Diagnostics Ltd. develops innovative, evidence-based educational tools designed to help parents and clinicians understand and manage a child's health from the earliest stages of life. The company does not have any intellectual property related to the model described in this manuscript.

Abstract Image

开发并验证特应性皮炎后续风险的临床预后风险评分。
特应性皮炎(AD)是一种常见、复杂、异质性的炎症性皮肤病。许多患者在5岁时发展为AD,直接影响生活质量,并增加其他合并症的风险,包括哮喘、过敏性鼻炎和食物过敏。聚丝蛋白突变和特应性家族史是AD发生的重要危险因素[1,4]。当单独用于风险分层时,每个指标的预测价值都很差,但特应性家族史已被用于研究环境[5,6],并且是当前的护理标准(SOC)。预后性阿尔茨海默病临床风险评分可以使临床医生更早地诊断阿尔茨海默病。它也可以被临床试验者用来丰富出生队列,对高危患者进行先验筛选。我们的目标是利用产前期的可用信息开发临床风险评分,考虑可解释性和适用性,并在外部,地理独立的数据集上验证它。训练数据集包括2010年至2019年期间在Leumit健康服务(Leumit) EMR中捕获的所有婴儿-母亲双体的电子病历(EMR),其中记录了3岁之前的AD诊断(n = 7370),以及从Leumit EMR中选择的婴儿-母亲双体的随机样本,其中在儿童的EMR中未诊断出AD (n = 63852)。Leumit是四个国家卫生服务提供者之一,其电子病历记录了所有医疗咨询、程序和处方的常规数据以及相关的社会人口数据。美国婴儿喂养实践研究2 (IFPS2)被用作验证数据集[7]。该队列包括2005年至2007年间出生的1807名全国分布的婴儿,其中389名(21.5%)在1岁时被医生诊断为阿尔茨海默病。关于研究方法和发现的其他信息可在在线存储库(https://github.com/tami-myor/AD-Score/tree/main).The)中获得,评分方法旨在生成从0到1的值,以概率形式表示可能的风险,如果缺少某些变量,可以有效地计算。将患者分为高危组(&gt; 0.5)、中危组(&lt; 0.5)和低危组(&lt; 0.35),各危组与特应性皮炎实际病例的均值差异有统计学意义(方差分析,p &lt; 0.001)。与SOC相比,在训练集和验证集中,低风险组的个体比父母没有特应性史的个体更容易发生AD,而高风险组的个体比父母有特应性史的个体更容易发生AD。与训练数据集中的低风险组相比,中风险组发生AD的单变量logistic回归模型的OR为2.30 (CI 2.15-2.46, p &lt; 0.001),高风险组为4.06 (CI 3.80-4.34, p &lt; 0.001)。另外,与验证数据集中的低风险组相比,中风险组发生AD的OR为1.74 (CI 1.34-2.27, p &lt; 0.001),高风险组为3.36 (CI 2.51-4.49, p &lt; 0.001)。这些高风险OR是原始多变量模型中计算的SOC亲代特应性史OR的两倍以上(OR 1.57, CI 1.43-1.72, p &lt; 0.001),并证明了该方法对当前SOC的实用性。这种预后性阿尔茨海默病风险评估模型利用已知的环境和家族关联成为一种可量化和适用的临床工具。它有可能告知临床医生和护理人员婴儿患阿尔茨海默病的风险,从而影响护理的连续性,使早期诊断成为可能,并针对患者采取其他特应性疾病的预防措施。此外,它可以减少ad预防临床试验的队列规模。虽然是根据EMR的流行病学数据开发的,但验证研究表明其适用于地理上不同的基于调查的队列,从而为在各种环境中部署打开了大门。验证数据集中的一个重要限制是它包含了1岁之前的诊断,而在开发数据集中是3岁。毫无疑问,遗传信息的加入将进一步增强模型的预测能力。未来的研究可以通过纳入其他记录的风险因素和探索这种方法在与特应性行军相关的其他条件下的效用来进一步推广这种方法。Tamar Landau:数据管理(支持),形式分析(领导),调查(支持),写作-审查&amp;编辑(平等)。Keren Gamrasni:项目管理(支持),调查(支持),写作-审查&amp;编辑(平等)。Alex Levin:项目管理(支持),调查(支持),写作-审查&amp;编辑(平等)。 Yotam Barlev:项目管理(支持),调查(支持),写作-审查&amp;编辑(平等)。奥利弗·桑德斯:资源(平等),监督(平等),调查(支持),写作-审查&amp;编辑(平等)。Shira Benor:资源(平等),监督(平等),调查(支持),写作-审查&amp;编辑(平等)。Michael Brandwein:概念化(领导),数据管理(支持),形式分析(支持),调查(领导),项目管理(支持),写作-原始草案准备(领导)。本研究是根据从以色列Leumit医疗服务赫尔辛基委员会(2022年10月,批准号0026-22-LEU)收到的批准方案和程序进行的。赫尔辛基委员会根据研究的性质,特别是对未识别和先前收集的数据的使用,获得了书面知情同意豁免。Tamar Landau、Keren Gamrasni、Alex Levin、Yotam Barlev和Michael Brandwein报告了MYOR诊断有限公司在研究期间的个人费用。MYOR诊断有限公司开发创新的、以证据为基础的教育工具,旨在帮助父母和临床医生从生命的最初阶段了解和管理儿童的健康。本公司不拥有与本文中描述的模型相关的任何知识产权。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
10.40
自引率
9.80%
发文量
189
审稿时长
3-8 weeks
期刊介绍: Clinical & Experimental Allergy strikes an excellent balance between clinical and scientific articles and carries regular reviews and editorials written by leading authorities in their field. In response to the increasing number of quality submissions, since 1996 the journals size has increased by over 30%. Clinical & Experimental Allergy is essential reading for allergy practitioners and research scientists with an interest in allergic diseases and mechanisms. Truly international in appeal, Clinical & Experimental Allergy publishes clinical and experimental observations in disease in all fields of medicine in which allergic hypersensitivity plays a part.
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