Genomic characterization of novel viruses associated with Olea europaea L. in South Africa

IF 2.5 4区医学 Q3 VIROLOGY

Archives of Virology Pub Date : 2024-09-27 DOI:10.1007/s00705-024-06132-1

David A. Read, Gerhard Pietersen, Bernard Slippers, Emma Steenkamp

引用次数: 0

Abstract

South Africa has a small but growing olive industry. Until now, no virological research has been carried out on this crop locally. Seventeen samples were collected from various olive cultivars from a single producer in the Stellenbosch growing area of South Africa. RNAseq was performed on total RNA, and the compositions of the metaviromes were determined. Olive leaf yellowing-associated virus was detected for the first time in South Africa, as well as four novel viruses from the family Closteroviridae and one each from the families Tymoviridae and Solemoviridae.

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南非油橄榄相关新型病毒的基因组特征。

南非的橄榄产业规模虽小，但不断发展壮大。到目前为止，当地还没有对这种作物进行过病毒学研究。我们从南非斯泰伦博斯种植区的一家生产商处收集了 17 个不同橄榄品种的样本。对总 RNA 进行了 RNAseq 分析，并确定了元病毒体的组成。在南非首次检测到了橄榄叶黄化相关病毒，以及四种新型克洛斯托病毒科病毒和一种Tymoviridae和Solemoviridae科病毒。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Archives of Virology 医学-病毒学

CiteScore

5.10

自引率

7.40%

发文量

324

审稿时长

4.5 months

期刊介绍： Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.