Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett
{"title":"The Complete Genome Sequence of <i>Chlorophonia sclateri</i> (Fringillidae, Passeriformes), the Puerto Rican Euphonia.","authors":"Sheylda N Diaz Mendez, Taylor Hains, Stacy Pirro, John Bates, Shannon Hackett","doi":"10.56179/001c.123420","DOIUrl":null,"url":null,"abstract":"<p><p>The Puerto Rican Euphonia (<i>Chlorophonia sclateri</i>) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of <i>Chlorophonia sclateri</i>. Illumina paired-end reads were assembled by a <i>de novo</i> method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).</p>","PeriodicalId":72362,"journal":{"name":"Biodiversity genomes","volume":"2024 ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11414600/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biodiversity genomes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.56179/001c.123420","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/9/6 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
The Puerto Rican Euphonia (Chlorophonia sclateri) was recognized as an endemic species in 2023 based solely on morphological differences. A brightly plumaged finch that inhabits a variety of habitats, including lowland dry, scrub forests and shade-coffee plantations (Carlo et. al 2004). To provide molecular evidence for the genetic comparison of Antillean Euphonias, we present the whole genome sequence of Chlorophonia sclateri. Illumina paired-end reads were assembled by a de novo method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28963854) and assembled genome (JBFPDU000000000).