Calibration and Comparison of SIR, SEIR/SLIR, and SLAIR Models for Influenza Dynamics: Insights from the 2016-2017 Season in the Valencian Community, Spain

Rim Adenane, Carlos Andreu-Vilarroig, Florin Avram, Rafael-Jacinto Villanueva
{"title":"Calibration and Comparison of SIR, SEIR/SLIR, and SLAIR Models for Influenza Dynamics: Insights from the 2016-2017 Season in the Valencian Community, Spain","authors":"Rim Adenane, Carlos Andreu-Vilarroig, Florin Avram, Rafael-Jacinto Villanueva","doi":"10.1093/imammb/dqae015","DOIUrl":null,"url":null,"abstract":"Influenza and influenza-like illnesses (ILI) pose significant challenges to healthcare systems globally. Mathematical models play a crucial role in understanding their dynamics, calibrating them to specific scenarios, and making projections about their evolution over time. This study proposes a calibration process for three different but well-known compartmental models - SIR, SEIR/SLIR, and SLAIR - using influenza data from the 2016-2017 season in the Valencian Community, Spain. The calibration process involves indirect calibration for the SIR and SLIR models, requiring post-processing to compare model output with data, while the SLAIR model is directly calibrated through direct comparison. Our calibration results demonstrate remarkable consistency between the SIR and SLIR models, with slight variations observed in the SLAIR model due to its unique design and calibration strategy. Importantly, all models align with existing evidence and intuitions found in the medical literature. Our findings suggest that at the onset of the epidemiological season, a significant proportion of the population (ranging from 29.08% to 43.75% of the total population) may have already entered the recovered state, likely due to immunization from the previous season. Additionally, we estimate that the percentage of infected individuals seeking healthcare services ranges from 5.7% to 12.2%. Through a well-founded and calibrated modeling approach, our study contributes to supporting, settling, and quantifying current medical issues despite the inherent uncertainties involved in influenza dynamics. The full Mathematica code can be downloaded from https://munqu.webs.upv.es/software.html.","PeriodicalId":519218,"journal":{"name":"Mathematical Medicine and Biology","volume":"189 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mathematical Medicine and Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/imammb/dqae015","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Influenza and influenza-like illnesses (ILI) pose significant challenges to healthcare systems globally. Mathematical models play a crucial role in understanding their dynamics, calibrating them to specific scenarios, and making projections about their evolution over time. This study proposes a calibration process for three different but well-known compartmental models - SIR, SEIR/SLIR, and SLAIR - using influenza data from the 2016-2017 season in the Valencian Community, Spain. The calibration process involves indirect calibration for the SIR and SLIR models, requiring post-processing to compare model output with data, while the SLAIR model is directly calibrated through direct comparison. Our calibration results demonstrate remarkable consistency between the SIR and SLIR models, with slight variations observed in the SLAIR model due to its unique design and calibration strategy. Importantly, all models align with existing evidence and intuitions found in the medical literature. Our findings suggest that at the onset of the epidemiological season, a significant proportion of the population (ranging from 29.08% to 43.75% of the total population) may have already entered the recovered state, likely due to immunization from the previous season. Additionally, we estimate that the percentage of infected individuals seeking healthcare services ranges from 5.7% to 12.2%. Through a well-founded and calibrated modeling approach, our study contributes to supporting, settling, and quantifying current medical issues despite the inherent uncertainties involved in influenza dynamics. The full Mathematica code can be downloaded from https://munqu.webs.upv.es/software.html.
校准和比较流感动态的 SIR、SEIR/SLIR 和 SLAIR 模型:西班牙巴伦西亚社区 2016-2017 年流感季节的启示
流感和流感样疾病(ILI)给全球医疗保健系统带来了巨大挑战。数学模型在了解它们的动态、根据特定情况校准它们以及预测它们随时间的演变方面发挥着至关重要的作用。本研究利用西班牙巴伦西亚社区 2016-2017 年流感季节的数据,提出了三种不同但著名的分区模型--SIR、SEIR/SLIR 和 SLAIR--的校准过程。校准过程涉及 SIR 和 SLIR 模型的间接校准,需要进行后处理以将模型输出与数据进行比较,而 SLAIR 模型则通过直接比较进行直接校准。我们的校准结果表明,SIR 和 SLIR 模型之间具有显著的一致性,SLAIR 模型因其独特的设计和校准策略而略有不同。重要的是,所有模型都与医学文献中的现有证据和直觉相吻合。我们的研究结果表明,在流行季节开始时,相当一部分人口(占总人口的 29.08% 至 43.75%)可能已经进入恢复状态,这很可能是由于上一流行季节的免疫接种所致。此外,我们估计寻求医疗保健服务的感染者比例从 5.7% 到 12.2% 不等。尽管流感动态存在固有的不确定性,但我们的研究通过有理有据、经过校准的建模方法,为支持、解决和量化当前的医疗问题做出了贡献。Mathematica 代码全文可从 https://munqu.webs.upv.es/software.html 下载。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信