Deciphering the role of FOXP4 in long COVID: exploring genetic associations, evolutionary conservation, and drug identification through bioinformatics analysis

IF 3.9 4区 生物学 Q1 GENETICS & HEREDITY
Manoj Kumar Gupta, Gayatri Gouda, Ramakrishna Vadde
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引用次数: 0

Abstract

Long COVID (LC) refers to a condition characterized by a variety of lingering symptoms that persist for more than 4 to 12 weeks following the initial acute SARS-CoV-2 infection. Recent research has suggested that the FOXP4 gene could potentially be a significant factor contributing to LC. Owing to that, this study investigates FOXP4’s role in LC by analyzing public datasets to understand its evolution and expression in diverse human populations and searching for drugs to reduce LC symptoms. Population genetic analysis of FOXP4 across human populations unmasks distinct genetic diversity patterns and positive selection signatures, suggesting potential population-specific susceptibilities to conditions like LC. Further, we also observed that FOXP4 experiences high expression during LC. To identify potential inhibitors, drug screening analysis identifies synthetic drugs like Glisoxepide, and natural compounds Kapurimycin A3 produced from Streptomyces sp, and Cucurbitacin B from Begonia nantoensis as promising candidates. Overall, our research contributes to understanding how FOXP4 may serve as a therapeutic target for mitigating the impact of LC.

Abstract Image

解密 FOXP4 在长 COVID 中的作用:通过生物信息学分析探索遗传关联、进化保护和药物鉴定
长COVID(LC)是指在初次急性SARS-CoV-2感染后持续4至12周以上的各种挥之不去的症状。最近的研究表明,FOXP4 基因可能是导致 LC 的一个重要因素。因此,本研究通过分析公共数据集来了解 FOXP4 在不同人群中的进化和表达情况,并寻找减轻 LC 症状的药物,从而研究 FOXP4 在 LC 中的作用。对不同人类群体中 FOXP4 的群体遗传分析揭示了不同的遗传多样性模式和正向选择特征,这表明特定群体对 LC 等疾病的潜在易感性。此外,我们还观察到 FOXP4 在 LC 期间的高表达。为了确定潜在的抑制剂,药物筛选分析确定了合成药物(如 Glisoxepide)、从链霉菌中提取的天然化合物 Kapurimycin A3 和从海棠中提取的葫芦素 B 为有希望的候选化合物。总之,我们的研究有助于了解 FOXP4 如何成为减轻 LC 影响的治疗靶点。
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来源期刊
CiteScore
3.50
自引率
3.40%
发文量
92
审稿时长
2 months
期刊介绍: Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes. The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?
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