A distributed memory parallel randomized Kaczmarz for sparse system of equations

IF 1.5 4区 计算机科学 Q3 COMPUTER SCIENCE, SOFTWARE ENGINEERING
Ercan Selçuk Bölükbaşı, Fahreddin Şükrü Torun, Murat Manguoğlu
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Abstract

Kaczmarz algorithm is an iterative projection method for solving system of linear equations that arise in science and engineering problems in various application domains. In addition to classical Kaczmarz, there are randomized and parallel variants. The main challenge of the parallel implementation is the dependency of each Kaczmarz iteration on its predecessor. Because of this dependency, frequent communication is required which results in a substantial overhead. In this study, a new distributed parallel method that reduces the communication overhead is proposed. The proposed method partitions the problem so that the Kaczmarz iterations on different blocks are less dependent. A frequency parameter is introduced to see the effect of communication frequency on the performance. The communication overhead is also decreased by allowing communication between processes only if they have shared non-zero columns. The experiments are performed using problems from various domains to compare the effects of different partitioning methods on the communication overhead and performance. Finally, parallel speedups of the proposed method on larger problems are presented.

Abstract Image

稀疏方程组的分布式内存并行随机化卡兹马兹算法
Kaczmarz 算法是一种迭代投影法,用于解决各种应用领域的科学和工程问题中出现的线性方程组。除经典 Kaczmarz 算法外,还有随机和并行变体。并行执行的主要挑战在于每个 Kaczmarz 迭代都依赖于前一个迭代。由于这种依赖性,需要进行频繁的通信,从而导致大量的开销。本研究提出了一种新的分布式并行方法,可以减少通信开销。所提出的方法对问题进行了分割,从而降低了不同区块上的 Kaczmarz 迭代的依赖性。为了了解通信频率对性能的影响,引入了一个频率参数。只有当进程共享非零列时,才允许进程间通信,从而降低了通信开销。实验使用了不同领域的问题,以比较不同分区方法对通信开销和性能的影响。最后,介绍了所提方法在较大问题上的并行加速效果。
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来源期刊
Concurrency and Computation-Practice & Experience
Concurrency and Computation-Practice & Experience 工程技术-计算机:理论方法
CiteScore
5.00
自引率
10.00%
发文量
664
审稿时长
9.6 months
期刊介绍: Concurrency and Computation: Practice and Experience (CCPE) publishes high-quality, original research papers, and authoritative research review papers, in the overlapping fields of: Parallel and distributed computing; High-performance computing; Computational and data science; Artificial intelligence and machine learning; Big data applications, algorithms, and systems; Network science; Ontologies and semantics; Security and privacy; Cloud/edge/fog computing; Green computing; and Quantum computing.
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