{"title":"Regulation of nitrogen isotopic ratios of cellular components","authors":"Naohiko Ohkouchi, Yuta Isaji, Nanako O. Ogawa","doi":"10.1186/s40645-024-00646-7","DOIUrl":null,"url":null,"abstract":"<p>This paper is an attempt to generalize the nitrogen isotope information of the molecules that make up the cell from our point of view. Nitrogen in the cell exists as 20 proteinaceous amino acids, nucleobases, hemes, chlorophylls, and others, and their composition is similar among organisms. Based on a physiologically simple autonomous system that maintains a balance between inputs and outputs, it is theoretically predicted that <sup>15</sup>N is distributed to each cellular compound with a certain regularity, and thus a specific relationship in nitrogen isotopic ratios among compounds. Previous studies essentially confirm this. The nitrogen isotopic ratio of compound <i>i</i> constituting the cell can be generalized as <i>δ</i><sup>15</sup>N<sub><i>i</i></sub> = <i>δ</i><sup>15</sup>N<sub>plant</sub> + <i>Δ</i><sub>i</sub> (<i>TP</i> − 1) + <i>γ</i><sub><i>i</i></sub>, where TP represents the trophic position, and <i>Δ</i><sub><i>i</i></sub> and <i>γ</i><sub><i>i</i></sub> are the trophic discrimination factor and the intracellular <sup>15</sup>N distribution of compound <i>i</i>, respectively. Knowing reliable values of <i>Δ</i><sub><i>i</i></sub> and <i>γ</i><sub><i>i</i></sub> will help us to better understand nitrogen dynamics in the biosphere and advance our understanding of the picture of the Earth’s environment through biogeochemistry.</p>","PeriodicalId":54272,"journal":{"name":"Progress in Earth and Planetary Science","volume":"39 1","pages":""},"PeriodicalIF":3.5000,"publicationDate":"2024-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Progress in Earth and Planetary Science","FirstCategoryId":"89","ListUrlMain":"https://doi.org/10.1186/s40645-024-00646-7","RegionNum":3,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"GEOSCIENCES, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
This paper is an attempt to generalize the nitrogen isotope information of the molecules that make up the cell from our point of view. Nitrogen in the cell exists as 20 proteinaceous amino acids, nucleobases, hemes, chlorophylls, and others, and their composition is similar among organisms. Based on a physiologically simple autonomous system that maintains a balance between inputs and outputs, it is theoretically predicted that 15N is distributed to each cellular compound with a certain regularity, and thus a specific relationship in nitrogen isotopic ratios among compounds. Previous studies essentially confirm this. The nitrogen isotopic ratio of compound i constituting the cell can be generalized as δ15Ni = δ15Nplant + Δi (TP − 1) + γi, where TP represents the trophic position, and Δi and γi are the trophic discrimination factor and the intracellular 15N distribution of compound i, respectively. Knowing reliable values of Δi and γi will help us to better understand nitrogen dynamics in the biosphere and advance our understanding of the picture of the Earth’s environment through biogeochemistry.
期刊介绍:
Progress in Earth and Planetary Science (PEPS), a peer-reviewed open access e-journal, was launched by the Japan Geoscience Union (JpGU) in 2014. This international journal is devoted to high-quality original articles, reviews and papers with full data attached in the research fields of space and planetary sciences, atmospheric and hydrospheric sciences, human geosciences, solid earth sciences, and biogeosciences. PEPS promotes excellent review articles and welcomes articles with electronic attachments including videos, animations, and large original data files. PEPS also encourages papers with full data attached: papers with full data attached are scientific articles that preserve the full detailed raw research data and metadata which were gathered in their preparation and make these data freely available to the research community for further analysis.