Multi-dimensional Scaling from K-Nearest Neighbourhood Distances

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS
Wenjian Du, Jia Li
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Abstract

Multi-dimensional scaling (MDS) with incomplete distance information represents a significant challenging inverse problem in computational geometry. This technique finds expensive applications in the fields of surface, manifold, and cubicle reconstructions, and is also relevant in the context of social networks. While a majority of existing methodologies tend to provide accurate results primarily when the missing distance indices are chosen randomly or when the omission rate is below 50%, our research proposes an innovative approach. We present a robust MDS framework when distances to the k-nearest neighbors (kNN) are known, even in situations characterized by a high coherence of missing indices. Our proposed strategy starts with a local reconstruction phase based on local correlation. Subsequently, the global reconstruction phase is realized through two distinct models: one based on low-rank semi-definite programming (SDP) and the other rooted in a model utilizing the Frobenius norm. Throughout the global reconstruction, we incorporate the alternating direction method of multipliers (ADMM) and the Riemann gradient descent algorithm (RGrad). Numerical Simulations have demonstrated that for MDS from kNN distances, our proposed model and algorithm outperforms the existed SDP models in terms of the visual effect and error of Gram matrix. We further validate that our approach can reconstruct surfaces from as mere as 1% of kNN distances, which shows that the proposed model is robust to the high coherence of missing indices. Additionally, we propose another MDS model which is applicable from kNN distances with additive noise.

Abstract Image

根据 K 最近邻距离进行多维扩展
具有不完整距离信息的多维缩放(MDS)是计算几何中一个极具挑战性的逆问题。这种技术在曲面、流形和立方体重构领域应用广泛,在社交网络中也有重要意义。大多数现有方法主要倾向于在随机选择缺失的距离指数或遗漏率低于 50%时提供准确的结果,而我们的研究则提出了一种创新方法。在已知 k 近邻(kNN)距离的情况下,我们提出了一种稳健的 MDS 框架,即使在缺失指数高度一致的情况下也是如此。我们提出的策略首先是基于局部相关性的局部重建阶段。随后,全局重建阶段通过两个不同的模型来实现:一个基于低阶半有限编程(SDP),另一个根植于利用弗罗贝尼斯规范的模型。在整个全局重建过程中,我们采用了交替方向乘法(ADMM)和黎曼梯度下降算法(RGrad)。数值模拟证明,对于 kNN 距离的 MDS,我们提出的模型和算法在视觉效果和格兰矩阵误差方面优于现有的 SDP 模型。我们进一步验证了我们的方法可以从仅 1% 的 kNN 距离中重建曲面,这表明我们提出的模型对高一致性的缺失指数具有鲁棒性。此外,我们还提出了另一种 MDS 模型,该模型适用于具有加性噪声的 kNN 距离。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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