Visibility graph-based covariance functions for scalable spatial analysis in non-convex partially Euclidean domains.

IF 1.4 4区 数学 Q3 BIOLOGY
Biometrics Pub Date : 2024-07-01 DOI:10.1093/biomtc/ujae089
Brian Gilbert, Abhirup Datta
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引用次数: 0

Abstract

We present a new method for constructing valid covariance functions of Gaussian processes for spatial analysis in irregular, non-convex domains such as bodies of water. Standard covariance functions based on geodesic distances are not guaranteed to be positive definite on such domains, while existing non-Euclidean approaches fail to respect the partially Euclidean nature of these domains where the geodesic distance agrees with the Euclidean distances for some pairs of points. Using a visibility graph on the domain, we propose a class of covariance functions that preserve Euclidean-based covariances between points that are connected in the domain while incorporating the non-convex geometry of the domain via conditional independence relationships. We show that the proposed method preserves the partially Euclidean nature of the intrinsic geometry on the domain while maintaining validity (positive definiteness) and marginal stationarity of the covariance function over the entire parameter space, properties which are not always fulfilled by existing approaches to construct covariance functions on non-convex domains. We provide useful approximations to improve computational efficiency, resulting in a scalable algorithm. We compare the performance of our method with those of competing state-of-the-art methods using simulation studies on synthetic non-convex domains. The method is applied to data regarding acidity levels in the Chesapeake Bay, showing its potential for ecological monitoring in real-world spatial applications on irregular domains.

基于可见性图的协方差函数,用于非凸部分欧几里得域的可扩展空间分析。
我们提出了一种构建高斯过程有效协方差函数的新方法,用于不规则、非凸域(如水体)的空间分析。基于大地测量距离的标准协方差函数不能保证在这些域上是正定的,而现有的非欧几里得方法不能尊重这些域的部分欧几里得性质,在这些域中,大地测量距离与某些点对的欧几里得距离一致。利用域上的可见性图,我们提出了一类协方差函数,该函数保留了域中相连点之间基于欧几里得的协方差,同时通过条件独立关系将域的非凸几何纳入其中。我们的研究表明,所提出的方法既能保留域上内在几何的部分欧氏性质,又能在整个参数空间内保持协方差函数的有效性(正定性)和边际静止性,而现有的在非凸域上构建协方差函数的方法并不总能满足这些特性。我们提供了有用的近似值来提高计算效率,从而产生了一种可扩展的算法。我们通过对合成非凸域的模拟研究,比较了我们的方法和其他最先进方法的性能。我们将该方法应用于切萨皮克湾的酸度水平数据,显示了它在现实世界不规则域空间应用中进行生态监测的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biometrics
Biometrics 生物-生物学
CiteScore
2.70
自引率
5.30%
发文量
178
审稿时长
4-8 weeks
期刊介绍: The International Biometric Society is an international society promoting the development and application of statistical and mathematical theory and methods in the biosciences, including agriculture, biomedical science and public health, ecology, environmental sciences, forestry, and allied disciplines. The Society welcomes as members statisticians, mathematicians, biological scientists, and others devoted to interdisciplinary efforts in advancing the collection and interpretation of information in the biosciences. The Society sponsors the biennial International Biometric Conference, held in sites throughout the world; through its National Groups and Regions, it also Society sponsors regional and local meetings.
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