Robust mosquito species identification from diverse body and wing images using deep learning.

IF 3 2区 医学 Q1 PARASITOLOGY
Kristopher Nolte, Felix Gregor Sauer, Jan Baumbach, Philip Kollmannsberger, Christian Lins, Renke Lühken
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引用次数: 0

Abstract

Mosquito-borne diseases are a major global health threat. Traditional morphological or molecular methods for identifying mosquito species often require specialized expertise or expensive laboratory equipment. The use of convolutional neural networks (CNNs) to identify mosquito species based on images may offer a promising alternative, but their practical implementation often remains limited. This study explores the applicability of CNNs in classifying mosquito species. It compares the efficacy of body and wing depictions across three image collection methods: a smartphone, macro-lens attached to a smartphone and a professional stereomicroscope. The study included 796 specimens of four morphologically similar Aedes species, Aedes aegypti, Ae. albopictus, Ae. koreicus and Ae. japonicus japonicus. The findings of this study indicate that CNN models demonstrate superior performance in wing-based classification 87.6% (95% CI: 84.2-91.0) compared to body-based classification 78.9% (95% CI: 77.7-80.0). Nevertheless, there are notable limitations of CNNs as they perform reliably across multiple devices only when trained specifically on those devices, resulting in an average decline of mean accuracy by 14%, even with extensive image augmentation. Additionally, we also estimate the required training data volume for effective classification, noting a reduced requirement for wing-based classification compared to body-based methods. Our study underscores the viability of both body and wing classification methods for mosquito species identification while emphasizing the need to address practical constraints in developing accessible classification systems.

利用深度学习从不同的身体和翅膀图像中进行可靠的蚊子物种识别。
蚊子传播的疾病是全球健康的一大威胁。传统的形态学或分子学方法识别蚊子种类往往需要专业知识或昂贵的实验室设备。使用卷积神经网络(CNN)根据图像识别蚊子种类可能是一种很有前景的替代方法,但其实际应用往往仍然受到限制。本研究探讨了卷积神经网络在蚊子物种分类中的适用性。它比较了智能手机、智能手机上的微距镜头和专业体视显微镜这三种图像采集方法对身体和翅膀描绘的功效。这项研究包括埃及伊蚊、白纹伊蚊、朝鲜伊蚊和日本伊蚊这四种形态相似的伊蚊的 796 个标本。研究结果表明,与基于身体的分类结果 78.9%(95% CI:77.7-80.0)相比,CNN 模型在基于翅膀的分类结果中表现出 87.6%(95% CI:84.2-91.0)的卓越性能。不过,CNN 也存在明显的局限性,因为只有在对多种设备进行专门训练时,CNN 才能在这些设备上可靠地执行任务,这导致平均准确率下降了 14%,即使对图像进行了广泛的增强也是如此。此外,我们还估算了有效分类所需的训练数据量,注意到与基于身体的方法相比,基于翅膀的分类要求更低。我们的研究强调了身体和翅膀分类方法在蚊子物种识别中的可行性,同时也强调了在开发无障碍分类系统时解决实际限制因素的必要性。
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来源期刊
Parasites & Vectors
Parasites & Vectors 医学-寄生虫学
CiteScore
6.30
自引率
9.40%
发文量
433
审稿时长
1.4 months
期刊介绍: Parasites & Vectors is an open access, peer-reviewed online journal dealing with the biology of parasites, parasitic diseases, intermediate hosts, vectors and vector-borne pathogens. Manuscripts published in this journal will be available to all worldwide, with no barriers to access, immediately following acceptance. However, authors retain the copyright of their material and may use it, or distribute it, as they wish. Manuscripts on all aspects of the basic and applied biology of parasites, intermediate hosts, vectors and vector-borne pathogens will be considered. In addition to the traditional and well-established areas of science in these fields, we also aim to provide a vehicle for publication of the rapidly developing resources and technology in parasite, intermediate host and vector genomics and their impacts on biological research. We are able to publish large datasets and extensive results, frequently associated with genomic and post-genomic technologies, which are not readily accommodated in traditional journals. Manuscripts addressing broader issues, for example economics, social sciences and global climate change in relation to parasites, vectors and disease control, are also welcomed.
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