Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA

IF 4.4 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Kendra A. Ireland, Chase M. Kayrouz, Marissa L. Abbott, Mohammad R. Seyedsayamdost, Katherine M. Davis
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Abstract

Non-heme iron-dependent sulfoxide/selenoxide synthases (NHISS) constitute a unique metalloenzyme class capable of installing a C–S/Se bond onto histidine to generate thio/selenoimidazole antioxidants, such as ergothioneine and ovothiol. These natural products are increasingly recognized for their health benefits. Among associated ergothioneine-biosynthetic enzymes, type IV EgtBs stand out, as they exhibit low sequence similarity with other EgtB subfamilies due to their recent divergence from the ovothiol-biosynthetic enzyme OvoA. Herein, we present crystal structures of two representative EgtB-IV enzymes, offering insights into the basis for this evolutionary convergence and enhancing our understanding of NHISS active site organization more broadly. The ability to interpret how key residues modulate substrate specificity and regioselectivity has implications for downstream identification of divergent reactivity within the NHISS family. To this end, we identify a previously unclassified clade of OvoA-like enzymes with a seemingly hybrid set of characteristics, suggesting they may represent an evolutionary intermediate between OvoA and EgtB-IV.

Abstract Image

亚砜合成酶EgtB-IV(麦角硫因生物合成同源物卵硫醇合成酶OvoA)趋同进化的结构见解
非血红素铁依赖性亚砜/硒氧化物合酶(NHISS)是一类独特的金属酶,能够在组氨酸上安装 C-S/Se 键,生成硫代/硒酰亚胺唑类抗氧化剂,如麦角硫因和卵硫醇。这些天然产品对健康的益处日益得到认可。在相关的麦角硫因生物合成酶中,IV 型 EgtBs 脱颖而出,因为它们与其他 EgtB 亚家族的序列相似性较低,这是因为它们最近才从卵硫醇生物合成酶 OvoA 分化而来。在此,我们展示了两种具有代表性的 EgtB-IV 酶的晶体结构,为这种进化趋同的基础提供了见解,并更广泛地加深了我们对 NHISS 活性位点组织的理解。解释关键残基如何调节底物特异性和区域选择性的能力对下游识别 NHISS 家族中的不同反应性具有重要意义。为此,我们发现了一个以前未分类的类似 OvoA 酶的支系,它们具有一系列看似混合的特征,表明它们可能代表了 OvoA 和 EgtB-IV 之间的进化中间体。
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来源期刊
Structure
Structure 生物-生化与分子生物学
CiteScore
8.90
自引率
1.80%
发文量
155
审稿时长
3-8 weeks
期刊介绍: Structure aims to publish papers of exceptional interest in the field of structural biology. The journal strives to be essential reading for structural biologists, as well as biologists and biochemists that are interested in macromolecular structure and function. Structure strongly encourages the submission of manuscripts that present structural and molecular insights into biological function and mechanism. Other reports that address fundamental questions in structural biology, such as structure-based examinations of protein evolution, folding, and/or design, will also be considered. We will consider the application of any method, experimental or computational, at high or low resolution, to conduct structural investigations, as long as the method is appropriate for the biological, functional, and mechanistic question(s) being addressed. Likewise, reports describing single-molecule analysis of biological mechanisms are welcome. In general, the editors encourage submission of experimental structural studies that are enriched by an analysis of structure-activity relationships and will not consider studies that solely report structural information unless the structure or analysis is of exceptional and broad interest. Studies reporting only homology models, de novo models, or molecular dynamics simulations are also discouraged unless the models are informed by or validated by novel experimental data; rationalization of a large body of existing experimental evidence and making testable predictions based on a model or simulation is often not considered sufficient.
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