Investigating the missing-wedge problem in small-angle X-ray scattering tensor tomography across real and reciprocal space.

IF 2.5 3区 物理与天体物理
Journal of Synchrotron Radiation Pub Date : 2024-09-01 Epub Date: 2024-08-28 DOI:10.1107/S1600577524006702
Leonard C Nielsen, Torne Tänzer, Irene Rodriguez-Fernandez, Paul Erhart, Marianne Liebi
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Abstract

Small-angle-scattering tensor tomography is a technique for studying anisotropic nanostructures of millimetre-sized samples in a volume-resolved manner. It requires the acquisition of data through repeated tomographic rotations about an axis which is subjected to a series of tilts. The tilt that can be achieved with a typical setup is geometrically constrained, which leads to limits in the set of directions from which the different parts of the reciprocal space map can be probed. Here, we characterize the impact of this limitation on reconstructions in terms of the missing wedge problem of tomography, by treating the problem of tensor tomography as the reconstruction of a three-dimensional field of functions on the unit sphere, represented by a grid of Gaussian radial basis functions. We then devise an acquisition scheme to obtain complete data by remounting the sample, which we apply to a sample of human trabecular bone. Performing tensor tomographic reconstructions of limited data sets as well as the complete data set, we further investigate and validate the missing wedge problem by investigating reconstruction errors due to data incompleteness across both real and reciprocal space. Finally, we carry out an analysis of orientations and derived scalar quantities, to quantify the impact of this missing wedge problem on a typical tensor tomographic analysis. We conclude that the effects of data incompleteness are consistent with the predicted impact of the missing wedge problem, and that the impact on tensor tomographic analysis is appreciable but limited, especially if precautions are taken. In particular, there is only limited impact on the means and relative anisotropies of the reconstructed reciprocal space maps.

研究小角 X 射线散射张量断层扫描中跨越实空间和倒易空间的缺边问题。
小角散射张量断层扫描是一种以体积分辨方式研究毫米级样品各向异性纳米结构的技术。它要求通过围绕一个轴线的反复层析旋转来获取数据,而这个轴线会受到一系列倾斜。典型装置可实现的倾斜度受到几何限制,这导致了可探测倒易空间图不同部分的方向集受到限制。在这里,我们将张量断层成像问题视为单位球面上三维函数场的重建,用高斯径向基函数网格表示,从断层成像的缺失楔问题的角度描述了这种限制对重建的影响。然后,我们设计了一种采集方案,通过重新安装样本来获取完整数据,并将其应用于人体骨小梁样本。通过对有限数据集和完整数据集进行张量断层重构,我们进一步研究和验证了缺失楔问题,研究了由于实空间和倒易空间的数据不完整而导致的重构误差。最后,我们对方向和衍生标量进行了分析,以量化楔缺失问题对典型张量断层分析的影响。我们的结论是,数据不完整性的影响与缺失楔问题的预测影响一致,对张量断层分析的影响是明显的,但有限,尤其是在采取预防措施的情况下。特别是,对重建的倒易空间图的平均值和相对各向异性影响有限。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Synchrotron Radiation
Journal of Synchrotron Radiation INSTRUMENTS & INSTRUMENTATIONOPTICS&-OPTICS
CiteScore
5.60
自引率
12.00%
发文量
289
审稿时长
1 months
期刊介绍: Synchrotron radiation research is rapidly expanding with many new sources of radiation being created globally. Synchrotron radiation plays a leading role in pure science and in emerging technologies. The Journal of Synchrotron Radiation provides comprehensive coverage of the entire field of synchrotron radiation and free-electron laser research including instrumentation, theory, computing and scientific applications in areas such as biology, nanoscience and materials science. Rapid publication ensures an up-to-date information resource for scientists and engineers in the field.
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