Comparative time-series multi-omics analyses suggest H1.2 involvement in anoxic adaptation and cancer resistance.

IF 9.8 1区 生物学 Q1 Agricultural and Biological Sciences
PLoS Biology Pub Date : 2024-08-23 eCollection Date: 2024-08-01 DOI:10.1371/journal.pbio.3002778
Juan Du, Weiqiang Liu, Meng Li, Zihao Li, Xuanjing Li, Yichen Dai, Gaoming Liu, Xiao Wang, Pingfen Zhu, Vadim N Gladyshev, Xuming Zhou
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Abstract

The naked mole rat (NMR), Heterocephalus glaber, is known as the longest-lived rodent and is extraordinarily resistant to hypoxia and cancer. Here, both NMR embryonic fibroblasts (NEFs) and their mouse counterparts (MEFs) were subjected to anoxic conditions (0% O2, 5% CO2). A combination of comparative transcriptomics and proteomics was then employed to identify differentially expressed genes (DEGs). Notably, we observed distinct levels of histone H1.2 (encoded by HIST1H1C) accumulation between NEFs and MEFs. Subsequent mechanistic analyses showed that higher H1.2 expression in NEFs was associated with the lower expression of its inhibitor, PARP1. Additionally, we discovered that H1.2 can directly interact with HIF-1α PAS domains, thereby promoting the expression of HIF-1α through facilitating the dimerization with HIF-1β. The overexpression of H1.2 was also found to trigger autophagy and to suppress the migration of cancer cells, as well as the formation of xenograft tumors, via the NRF2/P62 signaling pathway. Moreover, an engineered H1.2 knock-in mouse model exhibited significantly extended survival in hypoxic conditions (4% O2) and showed a reduced rate of tumor formation. Collectively, our results indicate a potential mechanistic link between H1.2 and the dual phenomena of anoxic adaptation and cancer resistance.

时间序列多组学比较分析表明,H1.2 参与了缺氧适应和抗癌过程。
裸鼹鼠(Heterocephalus glaber)被称为最长寿的啮齿类动物,对缺氧和癌症具有超强的抵抗力。在这里,NMR 胚胎成纤维细胞(NEFs)及其对应的小鼠成纤维细胞(MEFs)都受到缺氧条件(0% O2、5% CO2)的影响。然后结合比较转录组学和蛋白质组学来鉴定差异表达基因(DEGs)。值得注意的是,我们观察到 NEFs 和 MEFs 之间组蛋白 H1.2(由 HIST1H1C 编码)的积累水平不同。随后的机理分析表明,NEFs 中较高的 H1.2 表达与其抑制剂 PARP1 的较低表达有关。此外,我们还发现 H1.2 可直接与 HIF-1α 的 PAS 结构域相互作用,从而通过促进与 HIF-1β 的二聚化来促进 HIF-1α 的表达。研究还发现,H1.2 的过表达可引发自噬,并通过 NRF2/P62 信号通路抑制癌细胞的迁移和异种移植瘤的形成。此外,H1.2基因敲入小鼠模型在缺氧条件(4% O2)下的存活时间明显延长,肿瘤形成率也有所降低。总之,我们的研究结果表明,H1.2 与缺氧适应和抗癌双重现象之间存在潜在的机理联系。
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来源期刊
PLoS Biology
PLoS Biology BIOCHEMISTRY & MOLECULAR BIOLOGY-BIOLOGY
CiteScore
15.40
自引率
2.00%
发文量
359
审稿时长
3-8 weeks
期刊介绍: PLOS Biology is the flagship journal of the Public Library of Science (PLOS) and focuses on publishing groundbreaking and relevant research in all areas of biological science. The journal features works at various scales, ranging from molecules to ecosystems, and also encourages interdisciplinary studies. PLOS Biology publishes articles that demonstrate exceptional significance, originality, and relevance, with a high standard of scientific rigor in methodology, reporting, and conclusions. The journal aims to advance science and serve the research community by transforming research communication to align with the research process. It offers evolving article types and policies that empower authors to share the complete story behind their scientific findings with a diverse global audience of researchers, educators, policymakers, patient advocacy groups, and the general public. PLOS Biology, along with other PLOS journals, is widely indexed by major services such as Crossref, Dimensions, DOAJ, Google Scholar, PubMed, PubMed Central, Scopus, and Web of Science. Additionally, PLOS Biology is indexed by various other services including AGRICOLA, Biological Abstracts, BIOSYS Previews, CABI CAB Abstracts, CABI Global Health, CAPES, CAS, CNKI, Embase, Journal Guide, MEDLINE, and Zoological Record, ensuring that the research content is easily accessible and discoverable by a wide range of audiences.
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