Mapping Endocytic Vesicular Acidification with a pH-Responsive DNA Nanomachine

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
ChemBioChem Pub Date : 2024-08-21 DOI:10.1002/cbic.202400363
Dr. Xiaodong Xie, Zhiyuan Liu, Xuelin Xiang, Dr. Shaopeng Wang, Dr. Zhaoshuai Gao, Lifeng Xu, Dr. Fei Ding, Prof. Qian Li
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引用次数: 0

Abstract

Mapping the endocytic vesicular acidification process is of prior importance to better understand the health and pathological processes of cells. Herein, by integrating a pH-sensitive i-motif and a pair of fluorescence resonance energy transfer (FRET) into a tetrahedral DNA framework (TDF), we develop a pH-responsive DNA nanomachine, allowing for efficient sensing of pH from 7.0 to 5.5 via the pH-triggered spatial proximity modulation of FRET. The inheriting endo-lysosome-targeting ability of TDF enables spatiotemporal tracking of endocytic vesicle acidification during the endosomal maturation process. Analysis of pH-dependent FRET response at single fluorescent spot level reveals the significant difference of endocytic vesicular acidification between normal and cancer cells. The performance of pH-responsive DNA nanomachine underlines its potential for studies on vesicle acidification-related pathologies as a universal platform.

Abstract Image

利用 pH 响应 DNA 纳米机械绘制内细胞囊泡酸化图
绘制内囊酸化过程图对于更好地了解细胞的健康和病理过程具有重要意义。在这里,我们将 pH 敏感的 i-motif 和一对荧光共振能量转移(FRET)整合到一个四面体 DNA 框架(TDF)中,开发出一种 pH 响应型 DNA 纳米机械,通过 pH 触发的 FRET 空间接近调制,有效感知 7.0 到 5.5 的 pH 值。TDF继承了内溶酶体的靶向能力,可以在内含体成熟过程中对内含囊酸化进行时空跟踪。在单个荧光点水平上分析 pH 依赖性 FRET 响应,可以发现正常细胞和癌细胞的内囊酸化存在显著差异。pH 响应 DNA 纳米机器的性能突出了它作为一个通用平台在研究囊泡酸化相关病理学方面的潜力。
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来源期刊
ChemBioChem
ChemBioChem 生物-生化与分子生物学
CiteScore
6.10
自引率
3.10%
发文量
407
审稿时长
1 months
期刊介绍: ChemBioChem (Impact Factor 2018: 2.641) publishes important breakthroughs across all areas at the interface of chemistry and biology, including the fields of chemical biology, bioorganic chemistry, bioinorganic chemistry, synthetic biology, biocatalysis, bionanotechnology, and biomaterials. It is published on behalf of Chemistry Europe, an association of 16 European chemical societies, and supported by the Asian Chemical Editorial Society (ACES).
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