Differential association of key bacterial groups with diatoms and Phaeocystis spp. during spring blooms in the Southern Ocean

IF 3.9 3区 生物学 Q2 MICROBIOLOGY
MicrobiologyOpen Pub Date : 2024-08-09 DOI:10.1002/mbo3.1428
Nyree J. West, Marine Landa, Ingrid Obernosterer
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Abstract

Interactions between phytoplankton and heterotrophic bacteria significantly influence the cycling of organic carbon in the ocean, with many of these interactions occurring at the micrometer scale. We explored potential associations between specific phytoplankton and bacteria in two size fractions, 0.8–3 µm and larger than 3 µm, at three naturally iron-fertilized stations and one high nutrient low chlorophyll station in the Southern Ocean. The composition of phytoplankton and bacterial communities was determined by sequencing the rbcL gene and 16S rRNA gene from DNA and RNA extracts, which represent presence and potential activity, respectively. Diatoms, particularly Thalassiosira, contributed significantly to the DNA sequences in the larger size fractions, while haptophytes were dominant in the smaller size fraction. Correlation analysis between the most abundant phytoplankton and bacterial operational taxonomic units revealed strong correlations between Phaeocystis and picoeukaryotes with SAR11, SAR116, Magnetospira, and Planktomarina. In contrast, most Thalassiosira operational taxonomic units showed the highest correlations with Polaribacter, Sulfitobacteria, Erythrobacter, and Sphingobium, while Fragilariopsis, Haslea, and Thalassionema were correlated with OM60, Fluviicola, and Ulvibacter. Our in-situ observations suggest distinct associations between phytoplankton and bacterial taxa, which could play crucial roles in nutrient cycling in the Southern Ocean.

Abstract Image

南大洋春季水华期间主要细菌群与硅藻和 Phaeocystis spp.
浮游植物和异养细菌之间的相互作用对海洋中有机碳的循环有重大影响,其中许多相互作用发生在微米尺度上。我们在南大洋的三个天然铁肥站和一个高营养低叶绿素站,探索了特定浮游植物与细菌之间在 0.8-3 微米和大于 3 微米这两个尺寸分段上的潜在联系。通过对 DNA 和 RNA 提取物中的 rbcL 基因和 16S rRNA 基因进行测序,确定了浮游植物和细菌群落的组成。硅藻(尤其是 Thalassiosira)在较大粒径部分的 DNA 序列中占很大比例,而在较小粒径部分则以隐藻为主。最丰富的浮游植物和细菌操作分类单元之间的相关性分析表明,辉绿藻和微核生物与 SAR11、SAR116、Magnetospira 和 Planktomarina 之间有很强的相关性。相比之下,大多数 Thalassiosira 运行分类单元与 Polaribacter、Sulfitobacteria、Erythrobacter 和 Sphingobium 的相关性最高,而 Fragilariopsis、Haslea 和 Thalassionema 与 OM60、Fluviicola 和 Ulvibacter 的相关性最高。我们的现场观测结果表明,浮游植物和细菌类群之间存在着不同的关联,它们可能在南大洋的营养循环中发挥着至关重要的作用。
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来源期刊
MicrobiologyOpen
MicrobiologyOpen MICROBIOLOGY-
CiteScore
8.00
自引率
0.00%
发文量
78
审稿时长
20 weeks
期刊介绍: MicrobiologyOpen is a peer reviewed, fully open access, broad-scope, and interdisciplinary journal delivering rapid decisions and fast publication of microbial science, a field which is undergoing a profound and exciting evolution in this post-genomic era. The journal aims to serve the research community by providing a vehicle for authors wishing to publish quality research in both fundamental and applied microbiology. Our goal is to publish articles that stimulate discussion and debate, as well as add to our knowledge base and further the understanding of microbial interactions and microbial processes. MicrobiologyOpen gives prompt and equal consideration to articles reporting theoretical, experimental, applied, and descriptive work in all aspects of bacteriology, virology, mycology and protistology, including, but not limited to: - agriculture - antimicrobial resistance - astrobiology - biochemistry - biotechnology - cell and molecular biology - clinical microbiology - computational, systems, and synthetic microbiology - environmental science - evolutionary biology, ecology, and systematics - food science and technology - genetics and genomics - geobiology and earth science - host-microbe interactions - infectious diseases - natural products discovery - pharmaceutical and medicinal chemistry - physiology - plant pathology - veterinary microbiology We will consider submissions across unicellular and cell-cluster organisms: prokaryotes (bacteria, archaea) and eukaryotes (fungi, protists, microalgae, lichens), as well as viruses and prions infecting or interacting with microorganisms, plants and animals, including genetic, biochemical, biophysical, bioinformatic and structural analyses. The journal features Original Articles (including full Research articles, Method articles, and Short Communications), Commentaries, Reviews, and Editorials. Original papers must report well-conducted research with conclusions supported by the data presented in the article. We also support confirmatory research and aim to work with authors to meet reviewer expectations. MicrobiologyOpen publishes articles submitted directly to the journal and those referred from other Wiley journals.
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