Texture-based speciation of otitis media-related bacterial biofilms from optical coherence tomography images using supervised classification.

Farzana R Zaki, Guillermo L Monroy, Jindou Shi, Kavya Sudhir, Stephen A Boppart
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Abstract

Otitis media (OM), a highly prevalent inflammatory middle-ear disease in children worldwide, is commonly caused by an infection, and can lead to antibiotic-resistant bacterial biofilms in recurrent/chronic OM cases. A biofilm related to OM typically contains one or multiple bacterial species. OCT has been used clinically to visualize the presence of bacterial biofilms in the middle ear. This study used OCT to compare microstructural image texture features from bacterial biofilms. The proposed method applied supervised machine-learning-based frameworks (SVM, random forest, and XGBoost) to classify multiple species bacterial biofilms from in vitro cultures and clinically-obtained in vivo images from human subjects. Our findings show that optimized SVM-RBF and XGBoost classifiers achieved more than 95% of AUC, detecting each biofilm class. These results demonstrate the potential for differentiating OM-causing bacterial biofilms through texture analysis of OCT images and a machine-learning framework, offering valuable insights for real-time in vivo characterization of ear infections.

利用监督分类法从光学相干断层扫描图像中对中耳炎相关细菌生物膜进行基于纹理的分类。
中耳炎(OM)是全球儿童高发的一种中耳炎性疾病,通常由感染引起,在复发性/慢性中耳炎病例中可导致抗生素耐药细菌生物膜。与 OM 相关的生物膜通常包含一种或多种细菌。OCT 已被临床用于观察中耳是否存在细菌生物膜。本研究使用 OCT 比较细菌生物膜的微结构图像纹理特征。所提出的方法应用了基于机器学习的监督框架(SVM、随机森林和 XGBoost),对体外培养和临床获得的人体活体图像中的多种细菌生物膜进行分类。我们的研究结果表明,经过优化的 SVM-RBF 和 XGBoost 分类器的 AUC 超过了 95%,能检测出每一类生物膜。这些结果证明了通过对 OCT 图像的纹理分析和机器学习框架来区分 OM 致病细菌生物膜的潜力,为耳部感染的实时活体特征描述提供了有价值的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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