Free-energy estimates from nonequilibrium trajectories under varying-temperature protocols

IF 2.4 3区 物理与天体物理 Q1 Mathematics
Stephen Whitelam
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Abstract

The Jarzynski equality allows the calculation of free-energy differences using values of work measured from nonequilibrium trajectories. The number of trajectories required to accurately estimate free-energy differences in this way grows sharply with the size of work fluctuations, motivating the search for protocols that perform desired transformations with minimum work. However, protocols of this nature can involve varying temperature, to which the Jarzynski equality does not apply. We derive a variant of the Jarzynski equality that applies to varying-temperature protocols, and show that it can have better convergence properties than the standard version of the equality. We derive this modified equality and the associated fluctuation relation within the framework of Markovian stochastic dynamics, complementing related derivations done within the framework of Hamiltonian dynamics.

Abstract Image

在不同温度协议下从非平衡轨迹估算自由能
利用贾兹恩斯基等式,可以利用从非平衡轨迹测得的功值计算自由能差。以这种方式精确估算自由能差所需的轨迹数量会随着功波动的大小而急剧增加,这就促使人们寻找能以最小功进行所需转换的协议。然而,这种性质的协议可能涉及温度的变化,而 Jarzynski 等式并不适用于这种情况。我们推导出了适用于温度变化协议的 Jarzynski 等式变体,并证明它比标准版本的等式具有更好的收敛特性。我们在马尔可夫随机动力学框架内推导出这一修正等式和相关的波动关系,补充了在汉密尔顿动力学框架内的相关推导。
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来源期刊
Physical review. E
Physical review. E 物理-物理:流体与等离子体
CiteScore
4.60
自引率
16.70%
发文量
0
审稿时长
3.3 months
期刊介绍: Physical Review E (PRE), broad and interdisciplinary in scope, focuses on collective phenomena of many-body systems, with statistical physics and nonlinear dynamics as the central themes of the journal. Physical Review E publishes recent developments in biological and soft matter physics including granular materials, colloids, complex fluids, liquid crystals, and polymers. The journal covers fluid dynamics and plasma physics and includes sections on computational and interdisciplinary physics, for example, complex networks.
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