Morphology, behavior, and phylogenomics of Oxytoxum lohmannii, Dinoflagellata.

IF 2.1 4区 生物学 Q3 MICROBIOLOGY
Elizabeth C Cooney, Dean M Jacobson, Gordon V Wolfe, Kelley J Bright, Juan F Saldarriaga, Patrick J Keeling, Brian S Leander, Suzanne L Strom
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Abstract

Dinoflagellates are an abundant and diverse group of protists representing a wealth of unique biology and ecology. While many dinoflagellates are photosynthetic or mixotrophic, many taxa are heterotrophs, often with complex feeding strategies. Compared to their photosynthetic counterparts, heterotrophic dinoflagellates remain understudied, as they are difficult to culture. One exception, a long-cultured isolate originally classified as Amphidinium but recently reclassified as Oxytoxum, has been the subject of a number of feeding, growth, and chemosensory studies. This lineage was recently determined to be closely related to Prorocentrum using phylogenetics of ribosomal RNA gene sequences, but the exact nature of this relationship remains unresolved. Using transcriptomes sequenced from culture and three single cells from the environment, we produce a robust phylogeny of 242 genes, revealing Oxytoxum is likely sister to the Prorocentrum clade, rather than nested within it. Molecular investigations uncover evidence of a reduced, nonphotosynthetic plastid and proteorhodopsin, a photoactive proton pump acquired horizontally from bacteria. We describe the ultrastructure of O. lohmannii, including densely packed trichocysts, and a new type of mucocyst. We observe that O. lohmannii feeds preferentially on cryptophytes using myzocytosis, but can also feed on various phytoflagellates using conventional phagocytosis. O. lohmannii is amenable to culture, providing an opportunity to better study heterotrophic dinoflagellate biology and feeding ecology.

Dinoflagellata Oxytoxum lohmannii 的形态学、行为学和系统发生组学。
甲藻是一种丰富多样的原生动物,具有丰富独特的生物学和生态学特征。虽然许多甲藻具有光合作用或混养功能,但也有许多类群具有异养功能,通常具有复杂的摄食策略。与光合作用的同类相比,异养甲藻的研究仍然不足,因为它们很难培养。其中一个例外是一个长期培养的分离物,它最初被归类为 Amphidinium,但最近被重新归类为 Oxytoxum。最近,利用核糖体 RNA 基因序列的系统发生学方法,确定该品系与 Prorocentrum 关系密切,但这种关系的确切性质仍未确定。利用从培养物和环境中提取的三个单细胞中测序的转录组,我们得出了一个包含 242 个基因的强大的系统发生学,揭示了 Oxytoxum 可能是 Prorocentrum 支系的姊妹,而不是嵌套在其中。分子研究发现了一种退化的非光合质体和蛋白光素的证据,蛋白光素是一种从细菌水平获得的光活性质子泵。我们描述了 O. lohmannii 的超微结构,包括密集的毛囊和一种新型粘液囊。我们观察到,O. lohmannii 利用贻贝吞噬作用优先捕食隐花植物,但也能利用传统的吞噬作用捕食各种植物鞭毛虫。O. lohmannii 适合培养,这为更好地研究异养甲藻生物学和摄食生态学提供了机会。
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来源期刊
CiteScore
4.30
自引率
4.50%
发文量
85
审稿时长
6-12 weeks
期刊介绍: The Journal of Eukaryotic Microbiology publishes original research on protists, including lower algae and fungi. Articles are published covering all aspects of these organisms, including their behavior, biochemistry, cell biology, chemotherapy, development, ecology, evolution, genetics, molecular biology, morphogenetics, parasitology, systematics, and ultrastructure.
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