Label free, machine learning informed plasma-based elemental biomarkers of Alzheimer's disease†

IF 3.1 2区 化学 Q2 CHEMISTRY, ANALYTICAL
Ali Safi, Noureddine Melikechi, Kemal Efe Eseller, Richard M. Gaschnig and Weiming Xia
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引用次数: 0

Abstract

Using inductively coupled plasma mass spectrometry (ICP-MS), we have measured the elemental concentrations of Na, Fe, Cu, P, Mg, Zn, K in plasma samples of 25 Alzheimer's disease (AD) patients and 34 healthy individuals. Given the multidimensional nature of the ICP-MS data, we used support vector machines and logistic regression to illustrate the elemental distribution of each donor and seek key features that may differentiate plasma samples of AD patients from those of healthy individuals. We found that ratios of the elemental concentrations of Na over K, Fe over Na, and P over Zn yield specificity, sensitivity, and accuracy of 79%, 84% and 81% respectively. This information was then used to seek from the mass spectrometric data a differentiation of the plasma samples from AD and healthy donors. Plotted as a function of the Na/K, Fe/Na, and P/Zn, the ICP-MS data reveals a linear delineation between the two groups of samples yielding to the correct classification 21 of 25 AD and 28 of 34 HC plasma samples. These findings highlight the importance of elemental ratios present in plasma and suggest that the ratios of the elemental concentrations of blood metals may be considered as biomarkers that can distinguish plasma samples of AD patients from healthy subjects.

Abstract Image

Abstract Image

无标签、基于机器学习的阿尔茨海默病血浆元素生物标志物
我们使用电感耦合等离子体质谱法(ICP-MS)测量了 25 名阿尔茨海默病(AD)患者和 34 名健康人血浆样本中的钠、铁、铜、磷、镁、锌、钾元素浓度。鉴于 ICP-MS 数据的多维性,我们使用支持向量机和逻辑回归来说明每个供体的元素分布情况,并寻找可能区分 AD 患者和健康人血浆样本的关键特征。我们发现,Na 相对于 K、Fe 相对于 Na 和 P 相对于 Zn 的元素浓度比值的特异性、灵敏度和准确度分别为 79%、84% 和 81%。然后,我们利用这些信息从质谱数据中寻求区分注意力缺失症和健康捐献者血浆样本的方法。通过绘制 Na/K、Fe/Na 和 P/Zn 的函数图,ICP-MS 数据揭示了两组样本之间的线性界限,在 25 个 AD 和 34 个 HC 血浆样本中,分别有 21 个和 28 个样本被正确分类。这些发现凸显了血浆中元素比率的重要性,并表明血液中金属元素浓度的比率可被视为生物标志物,可将注意力缺失症患者的血浆样本与健康人的血浆样本区分开来。
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来源期刊
CiteScore
6.20
自引率
26.50%
发文量
228
审稿时长
1.7 months
期刊介绍: Innovative research on the fundamental theory and application of spectrometric techniques.
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