A parsimonious Bayesian predictive model for forecasting new reported cases of West Nile disease

IF 8.8 3区 医学 Q1 Medicine
Saman Hosseini , Lee W. Cohnstaedt , John M. Humphreys , Caterina Scoglio
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引用次数: 0

Abstract

Upon researching predictive models related to West Nile virus disease, it is discovered that there are numerous parameters and extensive information in most models, thus contributing to unnecessary complexity. Another challenge frequently encountered is the lead time, which refers to the period for which predictions are made and often is too short. This paper addresses these issues by introducing a parsimonious method based on ICC curves, offering a logistic distribution model derived from the vector-borne SEIR model. Unlike existing models relying on diverse environmental data, our approach exclusively utilizes historical and present infected human cases (number of new cases). With a year-long lead time, the predictions extend throughout the 12 months, gaining precision as new data emerge. Theoretical conditions are derived to minimize Bayesian loss, enhancing predictive precision. We construct a Bayesian forecasting probability density function using carefully selected prior distributions. Applying these functions, we predict month-specific infections nationwide, rigorously evaluating accuracy with probabilistic metrics. Additionally, HPD credible intervals at 90%, 95%, and 99% levels is performed. Precision assessment is conducted for HPD intervals, measuring the proportion of intervals that does not include actual reported cases for 2020–2022.

预测西尼罗河病毒病新报告病例的简易贝叶斯预测模型
在研究与西尼罗河病毒疾病有关的预测模型时发现,大多数模型中都有大量参数和广泛的信息,因此造成了不必要的复杂性。另一个经常遇到的挑战是前导时间,前导时间指的是进行预测的时间,往往太短。本文通过引入一种基于 ICC 曲线的简便方法来解决这些问题,该方法提供了一种从矢量传播 SEIR 模型中衍生出来的逻辑分布模型。与依赖各种环境数据的现有模型不同,我们的方法只利用历史和当前的人类感染病例(新病例数)。在长达一年的准备时间内,预测结果将持续 12 个月,并随着新数据的出现而不断提高精确度。我们推导出理论条件,使贝叶斯损失最小化,从而提高预测精度。我们利用精心挑选的先验分布构建了贝叶斯预测概率密度函数。应用这些函数,我们预测了全国特定月份的感染情况,并用概率指标严格评估了准确性。此外,我们还对 90%、95% 和 99% 级别的 HPD 可信区间进行了评估。对 HPD 可信区间进行精确度评估,衡量区间中不包括 2020-2022 年实际报告病例的比例。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Infectious Disease Modelling
Infectious Disease Modelling Mathematics-Applied Mathematics
CiteScore
17.00
自引率
3.40%
发文量
73
审稿时长
17 weeks
期刊介绍: Infectious Disease Modelling is an open access journal that undergoes peer-review. Its main objective is to facilitate research that combines mathematical modelling, retrieval and analysis of infection disease data, and public health decision support. The journal actively encourages original research that improves this interface, as well as review articles that highlight innovative methodologies relevant to data collection, informatics, and policy making in the field of public health.
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