Development and validation of machine learning models to predict MDRO colonization or infection on ICU admission by using electronic health record data.

IF 4.8 2区 医学 Q1 INFECTIOUS DISEASES
Yun Li, Yuan Cao, Min Wang, Lu Wang, Yiqi Wu, Yuan Fang, Yan Zhao, Yong Fan, Xiaoli Liu, Hong Liang, Mengmeng Yang, Rui Yuan, Feihu Zhou, Zhengbo Zhang, Hongjun Kang
{"title":"Development and validation of machine learning models to predict MDRO colonization or infection on ICU admission by using electronic health record data.","authors":"Yun Li, Yuan Cao, Min Wang, Lu Wang, Yiqi Wu, Yuan Fang, Yan Zhao, Yong Fan, Xiaoli Liu, Hong Liang, Mengmeng Yang, Rui Yuan, Feihu Zhou, Zhengbo Zhang, Hongjun Kang","doi":"10.1186/s13756-024-01428-y","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Multidrug-resistant organisms (MDRO) pose a significant threat to public health. Intensive Care Units (ICU), characterized by the extensive use of antimicrobial agents and a high prevalence of bacterial resistance, are hotspots for MDRO proliferation. Timely identification of patients at high risk for MDRO can aid in curbing transmission, enhancing patient outcomes, and maintaining the cleanliness of the ICU environment. This study focused on developing a machine learning (ML) model to identify patients at risk of MDRO during the initial phase of their ICU stay.</p><p><strong>Methods: </strong>Utilizing patient data from the First Medical Center of the People's Liberation Army General Hospital (PLAGH-ICU) and the Medical Information Mart for Intensive Care (MIMIC-IV), the study analyzed variables within 24 h of ICU admission. Machine learning algorithms were applied to these datasets, emphasizing the early detection of MDRO colonization or infection. Model efficacy was evaluated by the area under the receiver operating characteristics curve (AUROC), alongside internal and external validation sets.</p><p><strong>Results: </strong>The study evaluated 3,536 patients in PLAGH-ICU and 34,923 in MIMIC-IV, revealing MDRO prevalence of 11.96% and 8.81%, respectively. Significant differences in ICU and hospital stays, along with mortality rates, were observed between MDRO positive and negative patients. In the temporal validation, the PLAGH-ICU model achieved an AUROC of 0.786 [0.748, 0.825], while the MIMIC-IV model reached 0.744 [0.723, 0.766]. External validation demonstrated reduced model performance across different datasets. Key predictors included biochemical markers and the duration of pre-ICU hospital stay.</p><p><strong>Conclusions: </strong>The ML models developed in this study demonstrated their capability in early identification of MDRO risks in ICU patients. Continuous refinement and validation in varied clinical contexts remain essential for future applications.</p>","PeriodicalId":7950,"journal":{"name":"Antimicrobial Resistance and Infection Control","volume":"13 1","pages":"74"},"PeriodicalIF":4.8000,"publicationDate":"2024-07-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11227715/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Antimicrobial Resistance and Infection Control","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1186/s13756-024-01428-y","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

Abstract

Background: Multidrug-resistant organisms (MDRO) pose a significant threat to public health. Intensive Care Units (ICU), characterized by the extensive use of antimicrobial agents and a high prevalence of bacterial resistance, are hotspots for MDRO proliferation. Timely identification of patients at high risk for MDRO can aid in curbing transmission, enhancing patient outcomes, and maintaining the cleanliness of the ICU environment. This study focused on developing a machine learning (ML) model to identify patients at risk of MDRO during the initial phase of their ICU stay.

Methods: Utilizing patient data from the First Medical Center of the People's Liberation Army General Hospital (PLAGH-ICU) and the Medical Information Mart for Intensive Care (MIMIC-IV), the study analyzed variables within 24 h of ICU admission. Machine learning algorithms were applied to these datasets, emphasizing the early detection of MDRO colonization or infection. Model efficacy was evaluated by the area under the receiver operating characteristics curve (AUROC), alongside internal and external validation sets.

Results: The study evaluated 3,536 patients in PLAGH-ICU and 34,923 in MIMIC-IV, revealing MDRO prevalence of 11.96% and 8.81%, respectively. Significant differences in ICU and hospital stays, along with mortality rates, were observed between MDRO positive and negative patients. In the temporal validation, the PLAGH-ICU model achieved an AUROC of 0.786 [0.748, 0.825], while the MIMIC-IV model reached 0.744 [0.723, 0.766]. External validation demonstrated reduced model performance across different datasets. Key predictors included biochemical markers and the duration of pre-ICU hospital stay.

Conclusions: The ML models developed in this study demonstrated their capability in early identification of MDRO risks in ICU patients. Continuous refinement and validation in varied clinical contexts remain essential for future applications.

利用电子健康记录数据开发和验证机器学习模型,以预测重症监护病房入院时的 MDRO 定植或感染情况。
背景:耐多药生物(MDRO)对公共卫生构成重大威胁。重症监护病房(ICU)广泛使用抗菌药物,细菌耐药性高发,是 MDRO 扩散的热点。及时识别MDRO高风险患者有助于遏制传播、提高患者治疗效果并保持重症监护室环境的清洁。本研究的重点是开发一种机器学习(ML)模型,用于识别在重症监护室住院初期有感染 MDRO 风险的患者:本研究利用中国人民解放军总医院第一医疗中心(PLAGH-ICU)和重症监护医学信息中心(MIMIC-IV)的患者数据,分析了入住 ICU 24 小时内的变量。这些数据集采用了机器学习算法,强调早期检测MDRO定植或感染。通过接收者操作特征曲线下面积(AUROC)以及内部和外部验证集评估了模型的有效性:研究评估了 3,536 名 PLAGH-ICU 患者和 34,923 名 MIMIC-IV 患者,发现 MDRO 感染率分别为 11.96% 和 8.81%。MDRO阳性和阴性患者在重症监护室和住院时间以及死亡率方面存在显著差异。在时间验证中,PLAGH-ICU 模型的 AUROC 达到 0.786 [0.748, 0.825],而 MIMIC-IV 模型达到 0.744 [0.723, 0.766]。外部验证表明,不同数据集的模型性能有所下降。主要预测因素包括生化指标和重症监护室前住院时间:本研究开发的 ML 模型证明了其在 ICU 患者中早期识别 MDRO 风险的能力。在不同的临床环境中不断改进和验证对未来的应用至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Antimicrobial Resistance and Infection Control
Antimicrobial Resistance and Infection Control PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH -INFECTIOUS DISEASES
CiteScore
9.70
自引率
3.60%
发文量
140
审稿时长
13 weeks
期刊介绍: Antimicrobial Resistance and Infection Control is a global forum for all those working on the prevention, diagnostic and treatment of health-care associated infections and antimicrobial resistance development in all health-care settings. The journal covers a broad spectrum of preeminent practices and best available data to the top interventional and translational research, and innovative developments in the field of infection control.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信