{"title":"[Molecular tracing of <i>Biomphalaria straminea</i> in China].","authors":"L Duan, L Qu, Y Guo, W Gu, S Lü, Y Zhang, X Zhou","doi":"10.16250/j.32.1374.2024069","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>To investigate the origin of <i>Biomphalaria straminea</i> in China, so as to provide insights into assessment of schistosomiasis mansoni transmission risk and <i>B. straminea</i> control.</p><p><strong>Methods: </strong>Guanlan River, Dasha River, Shenzhen Reservoir, upper and lower reaches of Kuiyong River, and Xinzhen River in Shenzhen, China, were selected as sampling sites. Ten <i>Biomphalaria</i> samples were collected from each site, and genomic DNA was extracted from <i>Biomphalaria</i> samples. DNA samples were obtained from 15 <i>B. straminea</i> sampled from 5 sampling sites in Minas Gerais State, Pará State, Federal District, Pernambuco State, and Sao Paulo State in Brazil, South America. Cytochrome c oxidase I (<i>COI</i>) and mitochondrial 16S ribosomal RNA (<i>16S rRNA</i>) genes were sampled using the above DNA templates, and the amplified products were sequenced. The <i>COI</i> and <i>16S rRNA</i> gene sequences were downloaded from GenBank, and the sampling sites were acquired. All <i>COI</i> and 1<i>6S rRNA</i> gene sequences were aligned and evolutionary trees of <i>B. straminea</i> were created based on <i>COI</i> and <i>16S rRNA</i> gene sequences to identify the genetic similarity and evolutionary relationship between <i>B. straminea</i> samples from China and South America.</p><p><strong>Results: </strong>A total of 60 <i>COI</i> gene sequences with a length of 529 bp and 3 haplotypes were obtained from <i>B. straminea</i> sampled from China. There were 165 <i>COI</i> gene sequences of <i>B. straminea</i> retrieved from GenBank, and following alignment with the above 60 gene sequences, a total of 33 haplotypes were obtained. Phylogenetic analysis showed that the three haplotypes of <i>B. straminea</i> from China were clustered into one clade, among which the haplotype China11 and three <i>B. straminea</i> samples from Brazil retrieved from GenBank belonged to the same haplotype. Geographical evolution analysis showed that the <i>B. straminea</i> samples from three sampling sites along eastern coasts of Brazil had the same haplotype with China11, and <i>B. straminea</i> samples from other two sampling sites were closely, genetically related to China11. A total of 60 <i>16S rDNA</i> gene sequences with approximately 322 bp in length were amplified from <i>B. straminea</i> in China, with 2 haplotypes identified. A total of 70 <i>16S rDNA</i> gene sequences of <i>B. straminea</i> were captured from GenBank. Phylogenetic analysis showed that <i>Biomphalaria</i> snails collected from China were clustered into a clade, and the haplotype China64 and the haplotype 229BS from Brazil shared the same haplotype. The 49 <i>16S rDNA</i> gene sequences of <i>B. straminea</i> from 25 sampling sites in southern Brazil, which were captured from GenBank, were included in the present analysis, and the <i>B. straminea</i> from 3 sampling sites shared the same haplotype with China64 in China. Geographical evolution analysis based on <i>COI</i> and <i>16S rRNA</i> gene sequences showed that <i>B. straminea</i> sampled from eastern coastal areas of Brazil shared the same haplotypes in two gene fragment sequences with <i>Biomphalaria</i> snails collected from China.</p><p><strong>Conclusions: </strong>The <i>Biomphalaria</i> snails in China are characterized as <i>B. straminea</i>, which have a low genetic diversity. The <i>Biomphalaria</i> snails in China have a high genetic similarity with <i>B. straminea</i> sampled from eastern coastal areas of Brazil, which may have originated from the eastern coastal areas of Brazil.</p>","PeriodicalId":38874,"journal":{"name":"中国血吸虫病防治杂志","volume":"36 3","pages":"272-278"},"PeriodicalIF":0.0000,"publicationDate":"2024-06-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"中国血吸虫病防治杂志","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.16250/j.32.1374.2024069","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 0
Abstract
Objective: To investigate the origin of Biomphalaria straminea in China, so as to provide insights into assessment of schistosomiasis mansoni transmission risk and B. straminea control.
Methods: Guanlan River, Dasha River, Shenzhen Reservoir, upper and lower reaches of Kuiyong River, and Xinzhen River in Shenzhen, China, were selected as sampling sites. Ten Biomphalaria samples were collected from each site, and genomic DNA was extracted from Biomphalaria samples. DNA samples were obtained from 15 B. straminea sampled from 5 sampling sites in Minas Gerais State, Pará State, Federal District, Pernambuco State, and Sao Paulo State in Brazil, South America. Cytochrome c oxidase I (COI) and mitochondrial 16S ribosomal RNA (16S rRNA) genes were sampled using the above DNA templates, and the amplified products were sequenced. The COI and 16S rRNA gene sequences were downloaded from GenBank, and the sampling sites were acquired. All COI and 16S rRNA gene sequences were aligned and evolutionary trees of B. straminea were created based on COI and 16S rRNA gene sequences to identify the genetic similarity and evolutionary relationship between B. straminea samples from China and South America.
Results: A total of 60 COI gene sequences with a length of 529 bp and 3 haplotypes were obtained from B. straminea sampled from China. There were 165 COI gene sequences of B. straminea retrieved from GenBank, and following alignment with the above 60 gene sequences, a total of 33 haplotypes were obtained. Phylogenetic analysis showed that the three haplotypes of B. straminea from China were clustered into one clade, among which the haplotype China11 and three B. straminea samples from Brazil retrieved from GenBank belonged to the same haplotype. Geographical evolution analysis showed that the B. straminea samples from three sampling sites along eastern coasts of Brazil had the same haplotype with China11, and B. straminea samples from other two sampling sites were closely, genetically related to China11. A total of 60 16S rDNA gene sequences with approximately 322 bp in length were amplified from B. straminea in China, with 2 haplotypes identified. A total of 70 16S rDNA gene sequences of B. straminea were captured from GenBank. Phylogenetic analysis showed that Biomphalaria snails collected from China were clustered into a clade, and the haplotype China64 and the haplotype 229BS from Brazil shared the same haplotype. The 49 16S rDNA gene sequences of B. straminea from 25 sampling sites in southern Brazil, which were captured from GenBank, were included in the present analysis, and the B. straminea from 3 sampling sites shared the same haplotype with China64 in China. Geographical evolution analysis based on COI and 16S rRNA gene sequences showed that B. straminea sampled from eastern coastal areas of Brazil shared the same haplotypes in two gene fragment sequences with Biomphalaria snails collected from China.
Conclusions: The Biomphalaria snails in China are characterized as B. straminea, which have a low genetic diversity. The Biomphalaria snails in China have a high genetic similarity with B. straminea sampled from eastern coastal areas of Brazil, which may have originated from the eastern coastal areas of Brazil.
期刊介绍:
Chinese Journal of Schistosomiasis Control (ISSN: 1005-6661, CN: 32-1374/R), founded in 1989, is a technical and scientific journal under the supervision of Jiangsu Provincial Health Commission and organised by Jiangsu Institute of Schistosomiasis Control. It is a scientific and technical journal under the supervision of Jiangsu Provincial Health Commission and sponsored by Jiangsu Institute of Schistosomiasis Prevention and Control. The journal carries out the policy of prevention-oriented, control-oriented, nationwide and grassroots, adheres to the tenet of scientific research service for the prevention and treatment of schistosomiasis and other parasitic diseases, and mainly publishes academic papers reflecting the latest achievements and dynamics of prevention and treatment of schistosomiasis and other parasitic diseases, scientific research and management, etc. The main columns are Guest Contributions, Experts‘ Commentary, Experts’ Perspectives, Experts' Forums, Theses, Prevention and Treatment Research, Experimental Research, The main columns include Guest Contributions, Expert Commentaries, Expert Perspectives, Expert Forums, Treatises, Prevention and Control Studies, Experimental Studies, Clinical Studies, Prevention and Control Experiences, Prevention and Control Management, Reviews, Case Reports, and Information, etc. The journal is a useful reference material for the professional and technical personnel of schistosomiasis and parasitic disease prevention and control research, management workers, and teachers and students of medical schools.
The journal is now included in important domestic databases, such as Chinese Core List (8th edition), China Science Citation Database (Core Edition), China Science and Technology Core Journals (Statistical Source Journals), and is also included in MEDLINE/PubMed, Scopus, EBSCO, Chemical Abstract, Embase, Zoological Record, JSTChina, Ulrichsweb, Western Pacific Region Index Medicus, CABI and other international authoritative databases.