Use of the Saccharomycopsis schoenii MET17 promoter for regulated heterologous gene expression.

IF 1.8 4区 生物学 Q3 GENETICS & HEREDITY
Mareike Rij, Jürgen Wendland
{"title":"Use of the Saccharomycopsis schoenii MET17 promoter for regulated heterologous gene expression.","authors":"Mareike Rij, Jürgen Wendland","doi":"10.1007/s00294-024-01294-6","DOIUrl":null,"url":null,"abstract":"<p><p>The ability to regulate the expression of genes is a central tool for the characterization of fungal genes. This is of particular interest to study genes required for specific processes or the effect of genes expressed only under specific conditions. Saccharomycopsis species show a unique property of necrotrophic mycoparasitism that is activated upon starvation. Here we describe the use of the MET17 promoter of S. schoenii as a tool to regulate gene expression based on the availability of methionine. Conditional expression was tested using lacZ and GFP reporter genes. Gene expression could be strongly down-regulated by the addition of methionine or cysteine to the growth medium and upregulated by starvation for methionine. We used X-gal (5-bromo-4-chloro-3-indolyl-β-d-galactopyranoside) to detect lacZ-expression in plate assays and ONPG (ortho-nitrophenyl-β-galactopyranoside) as a substrate for β-galactosidase in liquid-phase assays. For in vivo expression analyses we used fluorescence microscopy for the detection and localization of a MET17-driven histone H4-GFP reporter gene. With these assays we demonstrated the usefulness of the MET17 promoter to regulate expression of genes based on methionine availability. In silico analyses revealed similar promoter motifs as found in MET3 genes of Saccharomyces cerevisiae and Ashbya gossypii. This suggests a regulation of the MET17 promoter by CBF1 and MET31/MET32 in conjunction with the transcriptional activator MET4, which were also identified in the S. schoenii genome.</p>","PeriodicalId":10918,"journal":{"name":"Current Genetics","volume":null,"pages":null},"PeriodicalIF":1.8000,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11217035/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Genetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s00294-024-01294-6","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

The ability to regulate the expression of genes is a central tool for the characterization of fungal genes. This is of particular interest to study genes required for specific processes or the effect of genes expressed only under specific conditions. Saccharomycopsis species show a unique property of necrotrophic mycoparasitism that is activated upon starvation. Here we describe the use of the MET17 promoter of S. schoenii as a tool to regulate gene expression based on the availability of methionine. Conditional expression was tested using lacZ and GFP reporter genes. Gene expression could be strongly down-regulated by the addition of methionine or cysteine to the growth medium and upregulated by starvation for methionine. We used X-gal (5-bromo-4-chloro-3-indolyl-β-d-galactopyranoside) to detect lacZ-expression in plate assays and ONPG (ortho-nitrophenyl-β-galactopyranoside) as a substrate for β-galactosidase in liquid-phase assays. For in vivo expression analyses we used fluorescence microscopy for the detection and localization of a MET17-driven histone H4-GFP reporter gene. With these assays we demonstrated the usefulness of the MET17 promoter to regulate expression of genes based on methionine availability. In silico analyses revealed similar promoter motifs as found in MET3 genes of Saccharomyces cerevisiae and Ashbya gossypii. This suggests a regulation of the MET17 promoter by CBF1 and MET31/MET32 in conjunction with the transcriptional activator MET4, which were also identified in the S. schoenii genome.

Abstract Image

利用拟南芥 MET17 启动子调节异源基因表达。
调控基因表达的能力是鉴定真菌基因的核心工具。这对于研究特定过程所需的基因或仅在特定条件下表达的基因的作用尤其重要。酵母菌表现出一种独特的坏死性寄生特性,这种特性在饥饿时被激活。在这里,我们描述了如何利用 S. schoenii 的 MET17 启动子作为一种工具,根据蛋氨酸的可用性来调节基因的表达。我们使用 lacZ 和 GFP 报告基因对条件表达进行了测试。在生长培养基中添加蛋氨酸或半胱氨酸可强烈下调基因表达,而在蛋氨酸饥饿条件下则可上调基因表达。在平板检测中,我们使用 X-gal(5-溴-4-氯-3-吲哚基-β-d-吡喃半乳糖苷)检测 lacZ 的表达;在液相检测中,我们使用 ONPG(正硝基苯基-β-吡喃半乳糖苷)作为 β-半乳糖苷酶的底物。在体内表达分析中,我们使用荧光显微镜对 MET17 驱动的组蛋白 H4-GFP 报告基因进行了检测和定位。通过这些实验,我们证明了 MET17 启动子可以根据蛋氨酸的可用性来调节基因的表达。硅分析表明,MET17 启动子的启动子基序与酿酒酵母(Saccharomyces cerevisiae)和棉铃虫(Ashbya gossypii)的 MET3 基因相似。这表明 MET17 启动子受 CBF1 和 MET31/MET32 以及转录激活子 MET4 的调控,这些基因在 S. schoenii 基因组中也被发现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Current Genetics
Current Genetics 生物-遗传学
CiteScore
6.00
自引率
0.00%
发文量
34
审稿时长
1 months
期刊介绍: Current Genetics publishes genetic, genomic, molecular and systems-level analysis of eukaryotic and prokaryotic microorganisms and cell organelles. All articles are peer-reviewed. The journal welcomes submissions employing any type of research approach, be it analytical (aiming at a better understanding), applied (aiming at practical applications), synthetic or theoretical. Current Genetics no longer accepts manuscripts describing the genome sequence of mitochondria/chloroplast of a small number of species. Manuscripts covering sequence comparisons and analyses that include a large number of species will still be considered.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信