Clivia biosensor: Soil moisture identification based on electrophysiology signals with deep learning

IF 10.7 1区 生物学 Q1 BIOPHYSICS
Ji Qi , Chenrui Liu , Qiuping Wang , Yan Shi , Xiuxin Xia , Haoran Wang , Lingfang Sun , Hong Men
{"title":"Clivia biosensor: Soil moisture identification based on electrophysiology signals with deep learning","authors":"Ji Qi ,&nbsp;Chenrui Liu ,&nbsp;Qiuping Wang ,&nbsp;Yan Shi ,&nbsp;Xiuxin Xia ,&nbsp;Haoran Wang ,&nbsp;Lingfang Sun ,&nbsp;Hong Men","doi":"10.1016/j.bios.2024.116525","DOIUrl":null,"url":null,"abstract":"<div><p>Research has shown that plants have the ability to detect environmental changes and generate electrical signals in response. These electrical signals can regulate the physiological state of plants and produce corresponding feedback. This suggests that plants have the potential to be used as biosensors for monitoring environmental information. However, there are current challenges in linking environmental information with plant electrical signals, especially in collecting and classifying the corresponding electrical signals under soil moisture gradients. This study documented the electrical signals of clivia under different soil moisture gradients and created a dataset for classifying electrical signals. Subsequently, we proposed a lightweight convolutional neural network (CNN) model (PlantNet) for classifying the electrical signal dataset. Compared to traditional CNN models, our model achieved optimal classification performance with the lowest computational resource consumption. The model achieved an accuracy of 99.26%, precision of 99.31%, recall of 92.26%, F1-score of 99.21%, with 0.17M parameters, a size of 7.17MB, and 14.66M FLOPs. Therefore, this research provides scientific evidence for the future development of plants as biosensors for detecting soil moisture, and offers insight into developing plants as biosensors for detecting signals such as ozone, PM2.5, Volatile Organic Compounds(VOCs), and more. These studies are expected to drive the development of environmental monitoring technology and provide new pathways for better understanding the interaction between plants and the environment.</p></div>","PeriodicalId":259,"journal":{"name":"Biosensors and Bioelectronics","volume":null,"pages":null},"PeriodicalIF":10.7000,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biosensors and Bioelectronics","FirstCategoryId":"1","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S095656632400530X","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOPHYSICS","Score":null,"Total":0}
引用次数: 0

Abstract

Research has shown that plants have the ability to detect environmental changes and generate electrical signals in response. These electrical signals can regulate the physiological state of plants and produce corresponding feedback. This suggests that plants have the potential to be used as biosensors for monitoring environmental information. However, there are current challenges in linking environmental information with plant electrical signals, especially in collecting and classifying the corresponding electrical signals under soil moisture gradients. This study documented the electrical signals of clivia under different soil moisture gradients and created a dataset for classifying electrical signals. Subsequently, we proposed a lightweight convolutional neural network (CNN) model (PlantNet) for classifying the electrical signal dataset. Compared to traditional CNN models, our model achieved optimal classification performance with the lowest computational resource consumption. The model achieved an accuracy of 99.26%, precision of 99.31%, recall of 92.26%, F1-score of 99.21%, with 0.17M parameters, a size of 7.17MB, and 14.66M FLOPs. Therefore, this research provides scientific evidence for the future development of plants as biosensors for detecting soil moisture, and offers insight into developing plants as biosensors for detecting signals such as ozone, PM2.5, Volatile Organic Compounds(VOCs), and more. These studies are expected to drive the development of environmental monitoring technology and provide new pathways for better understanding the interaction between plants and the environment.

Clivia 生物传感器:基于电生理信号和深度学习的土壤湿度识别。
研究表明,植物有能力检测环境变化并产生电信号作为回应。这些电信号可以调节植物的生理状态并产生相应的反馈。这表明,植物有可能被用作监测环境信息的生物传感器。然而,目前在将环境信息与植物电信号联系起来方面存在挑战,尤其是在土壤湿度梯度条件下收集相应电信号并对其进行分类方面。本研究记录了不同土壤湿度梯度下的clivia电信号,并创建了电信号分类数据集。随后,我们提出了一种轻量级卷积神经网络(CNN)模型(PlantNet),用于对电信号数据集进行分类。与传统的卷积神经网络模型相比,我们的模型以最低的计算资源消耗实现了最佳的分类性能。该模型的准确率为 99.26%,精确率为 99.31%,召回率为 92.26%,F1 分数为 99.21%,参数为 0.17M,大小为 7.17MB,FLOP 为 14.66M。因此,这项研究为今后开发植物作为检测土壤湿度的生物传感器提供了科学依据,并为开发植物作为检测臭氧、PM2.5、挥发性有机化合物(VOCs)等信号的生物传感器提供了启示。这些研究有望推动环境监测技术的发展,并为更好地了解植物与环境之间的相互作用提供新的途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Biosensors and Bioelectronics
Biosensors and Bioelectronics 工程技术-电化学
CiteScore
20.80
自引率
7.10%
发文量
1006
审稿时长
29 days
期刊介绍: Biosensors & Bioelectronics, along with its open access companion journal Biosensors & Bioelectronics: X, is the leading international publication in the field of biosensors and bioelectronics. It covers research, design, development, and application of biosensors, which are analytical devices incorporating biological materials with physicochemical transducers. These devices, including sensors, DNA chips, electronic noses, and lab-on-a-chip, produce digital signals proportional to specific analytes. Examples include immunosensors and enzyme-based biosensors, applied in various fields such as medicine, environmental monitoring, and food industry. The journal also focuses on molecular and supramolecular structures for enhancing device performance.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信