Identification of southern Taiwan genetic variants in thyroid dyshormonogenesis through whole-exome sequencing.

The Kaohsiung journal of medical sciences Pub Date : 2024-08-01 Epub Date: 2024-06-25 DOI:10.1002/kjm2.12871
Ching-Chao Tsai, Yu-Ming Chang, Yen-Yin Chou, Shou-Yen Chen, Yu-Wen Pan, Meng-Che Tsai
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Abstract

Thyroid dyshormonogenesis (TDH) is responsible for 15%-25% of congenital hypothyroidism (CH) cases. Pathogenetic variants of this common inherited endocrine disorders vary geographically. Unraveling the genetic underpinnings of TDH is essential for genetic counseling and precise therapeutic strategies. This study aims to identify genetic variants associated with TDH in Southern Taiwan using whole exome sequencing (WES). We included CH patients diagnosed through newborn screening at a tertiary medical center from 2011 to 2022. Permanent TDH was determined based on imaging evidence of bilateral thyroid structure and the requirement for continuous medication beyond 3 years of age. Genomic DNA extracted from blood was used for exome library construction, and pathogenic variants were detected using an in-house algorithm. Of the 876 CH patients reviewed, 121 were classified as permanent, with 47 (40%) confirmed as TDH. WES was conducted for 45 patients, and causative variants were identified in 32 patients (71.1%), including DUOX2 (15 cases), TG (8 cases), TSHR (7 cases), TPO (5 cases), and DUOXA2 (1 case). Recurrent variants included DUOX2 c.3329G>A, TSHR c.1349G>A, TG c.1348delT, and TPO c.2268dupT. We identified four novel variants based on genotype, including TSHR c.1135C>T, TSHR c.1349G>C, TG c.2461delA, and TG c.2459T>A. This study underscores the efficacy of WES in providing definitive molecular diagnoses for TDH. Molecular diagnoses are instrumental in genetic counseling, formulating treatment, and developing management strategies. Future research integrating larger population cohorts is vital to further elucidate the genetic landscape of TDH.

通过全外显子组测序鉴定台湾南部甲状腺发育异常的基因变异。
在先天性甲状腺功能减退症(CH)病例中,甲状腺激素生成异常(TDH)占15%-25%。这种常见的遗传性内分泌疾病的致病变异因地域而异。揭示 TDH 的遗传基础对于遗传咨询和精确治疗策略至关重要。本研究旨在利用全外显子组测序(WES)鉴定台湾南部地区与 TDH 相关的遗传变异。我们纳入了2011年至2022年在一家三级医疗中心通过新生儿筛查确诊的CH患者。永久性TDH是根据双侧甲状腺结构的影像学证据和3岁后持续服药的要求确定的。从血液中提取的基因组DNA用于构建外显子组文库,并使用内部算法检测致病变异。在接受复查的876名CH患者中,121人被归类为永久性患者,其中47人(40%)被确诊为TDH。对45名患者进行了WES检测,发现了32名患者(71.1%)的致病变异,包括DUOX2(15例)、TG(8例)、TSHR(7例)、TPO(5例)和DUOXA2(1例)。复发变异包括 DUOX2 c.3329G>A、TSHR c.1349G>A、TG c.1348delT 和 TPO c.2268dupT。我们根据基因型确定了四种新型变异,包括 TSHR c.1135C>T、TSHR c.1349G>C、TG c.2461delA 和 TG c.2459T>A。这项研究强调了 WES 在提供 TDH 明确分子诊断方面的功效。分子诊断有助于遗传咨询、制定治疗方案和管理策略。未来整合更大规模人群的研究对于进一步阐明 TDH 的遗传情况至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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