Combining the fractional order derivative and machine learning for leaf water content estimation of spring wheat using hyper-spectral indices.

IF 4.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Zinhar Zununjan, Mardan Aghabey Turghan, Mutallip Sattar, Nijat Kasim, Bilal Emin, Abdugheni Abliz
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引用次数: 0

Abstract

Leaf water content (LWC) is a vital indicator of crop growth and development. While visible and near-infrared (VIS-NIR) spectroscopy makes it possible to estimate crop leaf moisture, spectral preprocessing and multiband spectral indices have important significance in the quantitative analysis of LWC. In this work, the fractional order derivative (FOD) was used for leaf spectral processing, and multiband spectral indices were constructed based on the band-optimization algorithm. Eventually, an integrated index, namely, the multiband spectral index (MBSI) and moisture index (MI), is proposed to estimate the LWC in spring wheat around Fu-Kang City, Xinjiang, China. The MBSIs for LWC were calculated from two types of spectral data: raw reflectance (RR) and the spectrum based on FOD. The LWC was estimated by combining machine learning (K-nearest neighbor, KNN; support vector machine, SVM; and artificial neural network, ANN). The results showed that the fractional derivative pretreatment of spectral data enhances the implied information of the spectrum (the maximum correlation coefficient appeared using a 0.8-order differential) and increases the number of sensitive bands, especially in the near-infrared bands (700-1100 nm). The correlations between LWC and the two-band index (RVI1156, 1628 nm), three-band indices (3BI-3(766, 478, 1042 nm), 3BI-4(1129, 1175, 471 nm), 3BI-5(814, 929, 525 nm), 3BI-6(1156, 1214, 802 nm), 3BI-7(929, 851, 446 nm)) based on FOD were higher than that of moisture indices and single-band spectrum, with r of - 0.71**, 0.74**, 0.73**, - 0.72**, 0.75** and - 0.76** for the correlation. The prediction accuracy of the two-band spectral indices (DVI(698, 1274 nm) DVI(698, 1274 nm) DVI(698, 1274 nm)) was higher than that of the moisture spectral index, with R2 of 0.81 and R2 of 0.79 for the calibration and validation, respectively. Due to a large amount of spectral indices, the correlation coefficient method was used to select the characteristic spectral index from full three-band indices. Among twenty seven models, the FWBI-3BI- 0.8 order model performed the best predictive ability (with an R2 of 0.86, RMSE of 2.11%, and RPD of 2.65). These findings confirm that combining spectral index optimization with machine learning is a highly effective method for inverting the leaf water content in spring wheat.

结合分数阶导数和机器学习,利用超光谱指数估算春小麦的叶片含水量。
叶片含水量(LWC)是作物生长和发育的重要指标。虽然可见光和近红外光谱(VIS-NIR)可以估算作物叶片水分,但光谱预处理和多波段光谱指数对叶片含水量的定量分析具有重要意义。本研究采用分数阶导数(FOD)进行叶片光谱处理,并基于波段优化算法构建多波段光谱指数。最终,提出了一种综合指数,即多波段光谱指数(MBSI)和水分指数(MI),用于估算中国新疆阜康市附近春小麦的LWC。LWC 的多波段光谱指数由两种光谱数据计算得出:原始反射率(RR)和基于 FOD 的光谱。结合机器学习(K-近邻、支持向量机和人工神经网络)对 LWC 进行了估算。结果表明,对光谱数据进行分数导数预处理可增强光谱的隐含信息(使用 0.8 阶微分可获得最大相关系数),并增加敏感波段的数量,尤其是在近红外波段(700-1100 nm)。基于 FOD 的 LWC 与双波段指数(RVI1156,1628 nm)、三波段指数(3BI-3(766,478,1042 nm),3BI-4(1129,1175,471 nm),3BI-5(814,929,525 nm),3BI-6(1156,1214,802 nm),3BI-7(929,851,446 nm))之间的相关性高于水分指数和单波段光谱,r 分别为 - 0.71**、0.74**、0.73**、- 0.72**、0.75**和- 0.76**。双波段光谱指数(DVI(698, 1274 nm) DVI(698, 1274 nm) DVI(698, 1274 nm))的预测精度高于水分光谱指数,校准和验证的 R2 分别为 0.81 和 0.79。由于光谱指数较多,因此采用相关系数法从全三波段指数中选择特征光谱指数。在 27 个模型中,FWBI-3BI- 0.8 阶模型的预测能力最强(R2 为 0.86,RMSE 为 2.11%,RPD 为 2.65)。这些研究结果证实,将光谱指数优化与机器学习相结合是一种非常有效的反演春小麦叶片含水量的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Plant Methods
Plant Methods 生物-植物科学
CiteScore
9.20
自引率
3.90%
发文量
121
审稿时长
2 months
期刊介绍: Plant Methods is an open access, peer-reviewed, online journal for the plant research community that encompasses all aspects of technological innovation in the plant sciences. There is no doubt that we have entered an exciting new era in plant biology. The completion of the Arabidopsis genome sequence, and the rapid progress being made in other plant genomics projects are providing unparalleled opportunities for progress in all areas of plant science. Nevertheless, enormous challenges lie ahead if we are to understand the function of every gene in the genome, and how the individual parts work together to make the whole organism. Achieving these goals will require an unprecedented collaborative effort, combining high-throughput, system-wide technologies with more focused approaches that integrate traditional disciplines such as cell biology, biochemistry and molecular genetics. Technological innovation is probably the most important catalyst for progress in any scientific discipline. Plant Methods’ goal is to stimulate the development and adoption of new and improved techniques and research tools and, where appropriate, to promote consistency of methodologies for better integration of data from different laboratories.
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