{"title":"Reconstructing the Global Migration History of <i>Phytophthora infestans</i> Toward Colombia.","authors":"Camilo Patarroyo, Florencia Lucca, Stéphane Dupas, Silvia Restrepo","doi":"10.1094/PHYTO-05-24-0163-R","DOIUrl":null,"url":null,"abstract":"<p><p>The evolution of new variants of plant pathogens is one of the biggest challenges to controlling and managing plant diseases. Of the forces driving these evolutionary processes, global migration events are particularly important for widely distributed diseases such as potato late blight, caused by the oomycete <i>Phytophthora infestans</i>. However, little is known about its migration routes outside North America and Europe. This work used genotypic data from population studies to elucidate the migration history originating the Colombian <i>P. infestans</i> population. For this purpose, a dataset of 1,706 <i>P. infestans</i> genotypes was recollected, representing North and South America, Europe, and Asia. Descriptive analysis and historical records from North America and Europe were used to propose three global migration hypotheses, differing on the origin of the disease (Mexico or Peru) and the hypothesis that it returned to South America from Europe. These scenarios were tested using approximate Bayesian computation. According to this analysis, the most probable scenario (posterior probability = 0.631) was the one proposing a Peruvian origin for <i>P. infestans</i>, an initial migration toward Colombia and Mexico, and a later event from Mexico to the United States and then to Europe and Asia, with no return to northern South America. In Colombia, the scenario considering a single migration from Peru and posterior migrations within Colombia was the most probable, with a posterior probability of 0.640. The obtained results support the hypothesis of a Peruvian origin for <i>P. infestans</i> followed by rare colonization events worldwide.</p>","PeriodicalId":20410,"journal":{"name":"Phytopathology","volume":" ","pages":"2151-2161"},"PeriodicalIF":2.6000,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Phytopathology","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1094/PHYTO-05-24-0163-R","RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/9/12 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
The evolution of new variants of plant pathogens is one of the biggest challenges to controlling and managing plant diseases. Of the forces driving these evolutionary processes, global migration events are particularly important for widely distributed diseases such as potato late blight, caused by the oomycete Phytophthora infestans. However, little is known about its migration routes outside North America and Europe. This work used genotypic data from population studies to elucidate the migration history originating the Colombian P. infestans population. For this purpose, a dataset of 1,706 P. infestans genotypes was recollected, representing North and South America, Europe, and Asia. Descriptive analysis and historical records from North America and Europe were used to propose three global migration hypotheses, differing on the origin of the disease (Mexico or Peru) and the hypothesis that it returned to South America from Europe. These scenarios were tested using approximate Bayesian computation. According to this analysis, the most probable scenario (posterior probability = 0.631) was the one proposing a Peruvian origin for P. infestans, an initial migration toward Colombia and Mexico, and a later event from Mexico to the United States and then to Europe and Asia, with no return to northern South America. In Colombia, the scenario considering a single migration from Peru and posterior migrations within Colombia was the most probable, with a posterior probability of 0.640. The obtained results support the hypothesis of a Peruvian origin for P. infestans followed by rare colonization events worldwide.
植物病原体新变种的进化是控制和管理植物病害的最大挑战之一。在推动这些进化过程的各种力量中,全球迁移事件对于广泛分布的病害尤为重要,例如由卵菌 Phytophthora infestans (Mont.) de Bary 引起的马铃薯晚疫病。然而,人们对其在北美和欧洲以外的迁移路线知之甚少。这项研究利用种群研究的基因型数据来阐明哥伦比亚 P. infestans 种群的迁移历史。为此,我们重新收集了 1706 个 P. infestans 基因型数据集,这些数据集代表了北美、南美、欧洲和亚洲。利用描述性分析和北美与欧洲的历史记录,提出了三种全球迁徙假说,分别针对疾病的原产地(墨西哥或秘鲁)和从欧洲回到南美的假说。使用近似贝叶斯计算法对这些假设进行了检验。根据该分析,最有可能的情况(后验概率 = 0.631)是假设 P. infestans 起源于秘鲁,最初向哥伦比亚和墨西哥迁移,后来从墨西哥迁往美国,再迁往欧洲和亚洲,没有返回南美洲北部。在哥伦比亚,考虑到来自秘鲁的单一迁移和哥伦比亚境内的后继迁移,后验概率为 0.640,是最有可能发生的情况。所获得的结果支持 P. infestans 起源于秘鲁,随后在全球范围内发生罕见殖民事件的假设。
期刊介绍:
Phytopathology publishes articles on fundamental research that advances understanding of the nature of plant diseases, the agents that cause them, their spread, the losses they cause, and measures that can be used to control them. Phytopathology considers manuscripts covering all aspects of plant diseases including bacteriology, host-parasite biochemistry and cell biology, biological control, disease control and pest management, description of new pathogen species description of new pathogen species, ecology and population biology, epidemiology, disease etiology, host genetics and resistance, mycology, nematology, plant stress and abiotic disorders, postharvest pathology and mycotoxins, and virology. Papers dealing mainly with taxonomy, such as descriptions of new plant pathogen taxa are acceptable if they include plant disease research results such as pathogenicity, host range, etc. Taxonomic papers that focus on classification, identification, and nomenclature below the subspecies level may also be submitted to Phytopathology.