The astrocyte-enriched gene deathstar plays a crucial role in the development, locomotion, and lifespan of D. melanogaster.

IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly Pub Date : 2024-12-01 Epub Date: 2024-06-17 DOI:10.1080/19336934.2024.2368336
Xiaoli Zhang, Dongyu Sun, Kyle Wong, Ammar Salkini, Hadi Najafi, Woo Jae Kim
{"title":"The astrocyte-enriched gene <i>deathstar</i> plays a crucial role in the development, locomotion, and lifespan of <i>D. melanogaster</i>.","authors":"Xiaoli Zhang, Dongyu Sun, Kyle Wong, Ammar Salkini, Hadi Najafi, Woo Jae Kim","doi":"10.1080/19336934.2024.2368336","DOIUrl":null,"url":null,"abstract":"<p><p>The <i>Drosophila melanogaster</i> brain is a complex organ with various cell types, orchestrating the development, physiology, and behaviors of the fly. While each cell type in <i>Drosophila</i> brain is known to express a unique gene set, their complete genetic profile is still unknown. Advances in the RNA sequencing techniques at single-cell resolution facilitate identifying novel cell type markers and/or re-examining the specificity of the available ones. In this study, exploiting a single-cell RNA sequencing data of <i>Drosophila</i> optic lobe, we categorized the cells based on their expression pattern for known markers, then the genes with enriched expression in astrocytes were identified. <i>CG11000</i> was identified as a gene with a comparable expression profile to the <i>Eaat1</i> gene, an astrocyte marker, in every individual cell inside the <i>Drosophila</i> optic lobe and midbrain, as well as in the entire <i>Drosophila</i> brain throughout its development. Consistent with our bioinformatics data, immunostaining of the brains dissected from transgenic adult flies showed co-expression of <i>CG11000</i> with <i>Eaat1</i> in a set of single cells corresponding to the astrocytes in the <i>Drosophila</i> brain. Physiologically, inhibiting <i>CG11000</i> through RNA interference disrupted the normal development of male <i>D. melanogaster</i>, while having no impact on females. Expression suppression of <i>CG11000</i> in adult flies led to decreased locomotion activity and also shortened lifespan specifically in astrocytes, indicating the gene's significance in astrocytes. We designated this gene as '<i>deathstar</i>' due to its crucial role in maintaining the star-like shape of glial cells, astrocytes, throughout their development into adult stage.</p>","PeriodicalId":12128,"journal":{"name":"Fly","volume":null,"pages":null},"PeriodicalIF":2.4000,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11185185/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fly","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/19336934.2024.2368336","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/6/17 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

The Drosophila melanogaster brain is a complex organ with various cell types, orchestrating the development, physiology, and behaviors of the fly. While each cell type in Drosophila brain is known to express a unique gene set, their complete genetic profile is still unknown. Advances in the RNA sequencing techniques at single-cell resolution facilitate identifying novel cell type markers and/or re-examining the specificity of the available ones. In this study, exploiting a single-cell RNA sequencing data of Drosophila optic lobe, we categorized the cells based on their expression pattern for known markers, then the genes with enriched expression in astrocytes were identified. CG11000 was identified as a gene with a comparable expression profile to the Eaat1 gene, an astrocyte marker, in every individual cell inside the Drosophila optic lobe and midbrain, as well as in the entire Drosophila brain throughout its development. Consistent with our bioinformatics data, immunostaining of the brains dissected from transgenic adult flies showed co-expression of CG11000 with Eaat1 in a set of single cells corresponding to the astrocytes in the Drosophila brain. Physiologically, inhibiting CG11000 through RNA interference disrupted the normal development of male D. melanogaster, while having no impact on females. Expression suppression of CG11000 in adult flies led to decreased locomotion activity and also shortened lifespan specifically in astrocytes, indicating the gene's significance in astrocytes. We designated this gene as 'deathstar' due to its crucial role in maintaining the star-like shape of glial cells, astrocytes, throughout their development into adult stage.

富含星形胶质细胞的死亡之星基因在黑腹蝇蛆的发育、运动和寿命中起着至关重要的作用。
黑腹果蝇的大脑是一个复杂的器官,有多种细胞类型,协调着果蝇的发育、生理和行为。虽然果蝇大脑中的每种细胞类型都能表达独特的基因组,但它们的完整基因图谱仍然未知。单细胞分辨率 RNA 测序技术的进步有助于发现新的细胞类型标记和/或重新研究现有标记的特异性。在本研究中,我们利用果蝇视叶的单细胞 RNA 测序数据,根据已知标记物的表达模式对细胞进行了分类,然后确定了在星形胶质细胞中富集表达的基因。在果蝇视叶和中脑以及整个果蝇大脑的发育过程中,CG11000基因与星形胶质细胞标记物Eaat1基因的表达谱相似。与我们的生物信息学数据一致的是,从转基因成虫的大脑中解剖出的免疫染色显示,在果蝇大脑中一组与星形胶质细胞相对应的单细胞中,CG11000与Eaat1共同表达。在生理学上,通过RNA干扰抑制CG11000会破坏雄性黑腹果蝇的正常发育,而对雌性没有影响。抑制CG11000在成年果蝇中的表达会导致其运动活性降低,同时也会缩短星形胶质细胞的寿命,这表明了该基因在星形胶质细胞中的重要作用。我们将该基因命名为 "死亡之星",因为它在神经胶质细胞(星形胶质细胞)发育到成体阶段的整个过程中,在维持星形胶质细胞形状方面起着至关重要的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Fly
Fly 生物-生化与分子生物学
CiteScore
2.90
自引率
0.00%
发文量
17
审稿时长
>12 weeks
期刊介绍: Fly is the first international peer-reviewed journal to focus on Drosophila research. Fly covers a broad range of biological sub-disciplines, ranging from developmental biology and organogenesis to sensory neurobiology, circadian rhythm and learning and memory, to sex determination, evolutionary biology and speciation. We strive to become the “to go” resource for every researcher working with Drosophila by providing a forum where the specific interests of the Drosophila community can be discussed. With the advance of molecular technologies that enable researchers to manipulate genes and their functions in many other organisms, Fly is now also publishing papers that use other insect model systems used to investigate important biological questions. Fly offers a variety of papers, including Original Research Articles, Methods and Technical Advances, Brief Communications, Reviews and Meeting Reports. In addition, Fly also features two unconventional types of contributions, Counterpoints and Extra View articles. Counterpoints are opinion pieces that critically discuss controversial papers questioning current paradigms, whether justified or not. Extra View articles, which generally are solicited by Fly editors, provide authors of important forthcoming papers published elsewhere an opportunity to expand on their original findings and discuss the broader impact of their discovery. Extra View authors are strongly encouraged to complement their published observations with additional data not included in the original paper or acquired subsequently.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信