Commentary on review: Forming new perspective approaches to determination of donor compatibility

IF 2.3 4区 医学 Q3 GENETICS & HEREDITY
Anat R. Tambur
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I do, however, fear that if the task was to provide new perspective on evaluating compatibility between recipient and donor, this review misses the forest for the trees.</p><p>Immune mechanisms are controlled by thousands of genes that drive much of the variability in immune responses, whether those are to pathogens, susceptibility to autoimmune diseases, or susceptibility to allo-stimulation. Each of these genes had evolved and diverged through mechanisms of essentiality, redundancy, and adaptability to provide diverse routes for the best protection to different populations under their own local threats (Quintana-Murci, <span>2019</span>). These evolutionary forces also necessitated the generation of pathways for redundancy in immune pathways, such that inhibition of one path would not lead to the demise of the individual/population. This means that testing for one, or even a few, pathways will not necessarily correlate with the overall composite response. We should further consider that beyond the ‘pure’ immune genes, additional variables participate in orchestrating an immune response including factors such as age and gender, and environmental exposures. Thus, the landscape of genes and molecules associated with immune activation is vast and polymorphic. We can opt to develop and validate more and more assays to assess allo-immunity as described in the aforementioned review, or we can direct our attention to the elephant in the room—better understanding of the underlying mechanisms leading to <i>differential</i> immunogenicity.</p><p>As Histocompatibility and Immunogenetics (H&amp;I) professionals, we appreciate that much of the adaptive immune response (and at least some of the innate response) is guided by the individual's specific HLA molecules. Those are the molecules that control much of our thymic education, that are instrumental for antigen processing and presentation, and that are involved in the most crucial steps of immune activation. The first step in a decision-making tree is ‘identify the problem’. In the context of allo-stimulation, we must therefore first understand <i>why</i> one's immune system perceives one HLA mismatch as more immunogenic and another mismatch as less immunogenic. With this information, deciphering immune activation should be less complex.</p><p>Following this rationale, the transformative software brought on by Rene Duquesnoy—HLA Matchmaker—attempted to provide a numeric histo-incompatibility risk stratification metric. Members of our community hastily adopted this approach, succumbing to the colloquial use of the term epitope and the implicit immune significance it invoked. Unfortunately, when questioning the immunologic basis of this approach, significant limitations were unveiled (Tambur &amp; Das, <span>2023</span>). A basic illustration of flaws in the HLA Matchmaker rationale is evident when analysing individual patients who received a donor with two HLA mismatches at a given locus (DQ in the example referenced; Tambur, <span>2019</span>). The informative cohort among these patients consists of those recipients who developed de novo donor-specific antibody (dnDSA) to one of the HLA mismatches but not the other mismatch. These patients represent a unique cohort in which each patient serves as its own control, where all external variables (such as levels of immunosuppression; other immune genes; gender; age; and other environmental exposures) are held constant, and the only variable is the quality of the HLA allele mismatch. One allele is clearly more immunogenic as it led to generation of dnDSA, and the other allele is evidently less immunogenic because it did not lead to DSA formation, even though the patient's immune system was robust enough to generate a response against the other mismatch. This cohort, studied in Tambur (<span>2019</span>), clearly showed that the more immunogenic allele was not always the allele with the highest mismatches, counted by HLA Matchmaker. Follow-up studies suggest that evolutionary and functional divergence of the mismatched alleles from the recipient's own HLA background is more aligned with generation of dnDSA (Maguire et al., <span>2024</span>). While this line of investigation must be confirmed by others, the logic behind it is in par with our understanding of the evolution of the HLA system, its extra ordinary polymorphism, and the natural selection processes that took place primarily due to infectious pathogens (e.g. Hill, <span>1991</span>). It stands to reason that some HLA alleles diverged in common paths, responding to similar selection pressure, while others diverged in opposing paths. The more immunologically divergent HLA alleles are, the more likely they are to be recognised as foreign.</p><p>I therefore believe that the role of H&amp;I community is to first and foremost understand the evolutionary divergence within the HLA system, and how it is guiding differential immunogenicity between recipient and donor in the context of transplantation. 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引用次数: 0

Abstract

Clarke and Nadat (2024) provide an overview of techniques currently used to detect HLA antigens and antibodies and describe approaches that attempt to quantify incompatibility between a transplant recipient and her/his donor per their HLA typing. They proceed to mention assays investigating qualities of the antibodies such as affinity and avidity as well as glycosylation state and describe approaches to study T and B lymphocytes’ clonality and receptor repertoires. Lastly, they briefly talk about tests to assess allo-immune memory and mention some assays to assess graft injury.

I applaud the authors for providing a condensed menu of tests available for transplant immunologists. I do, however, fear that if the task was to provide new perspective on evaluating compatibility between recipient and donor, this review misses the forest for the trees.

Immune mechanisms are controlled by thousands of genes that drive much of the variability in immune responses, whether those are to pathogens, susceptibility to autoimmune diseases, or susceptibility to allo-stimulation. Each of these genes had evolved and diverged through mechanisms of essentiality, redundancy, and adaptability to provide diverse routes for the best protection to different populations under their own local threats (Quintana-Murci, 2019). These evolutionary forces also necessitated the generation of pathways for redundancy in immune pathways, such that inhibition of one path would not lead to the demise of the individual/population. This means that testing for one, or even a few, pathways will not necessarily correlate with the overall composite response. We should further consider that beyond the ‘pure’ immune genes, additional variables participate in orchestrating an immune response including factors such as age and gender, and environmental exposures. Thus, the landscape of genes and molecules associated with immune activation is vast and polymorphic. We can opt to develop and validate more and more assays to assess allo-immunity as described in the aforementioned review, or we can direct our attention to the elephant in the room—better understanding of the underlying mechanisms leading to differential immunogenicity.

As Histocompatibility and Immunogenetics (H&I) professionals, we appreciate that much of the adaptive immune response (and at least some of the innate response) is guided by the individual's specific HLA molecules. Those are the molecules that control much of our thymic education, that are instrumental for antigen processing and presentation, and that are involved in the most crucial steps of immune activation. The first step in a decision-making tree is ‘identify the problem’. In the context of allo-stimulation, we must therefore first understand why one's immune system perceives one HLA mismatch as more immunogenic and another mismatch as less immunogenic. With this information, deciphering immune activation should be less complex.

Following this rationale, the transformative software brought on by Rene Duquesnoy—HLA Matchmaker—attempted to provide a numeric histo-incompatibility risk stratification metric. Members of our community hastily adopted this approach, succumbing to the colloquial use of the term epitope and the implicit immune significance it invoked. Unfortunately, when questioning the immunologic basis of this approach, significant limitations were unveiled (Tambur & Das, 2023). A basic illustration of flaws in the HLA Matchmaker rationale is evident when analysing individual patients who received a donor with two HLA mismatches at a given locus (DQ in the example referenced; Tambur, 2019). The informative cohort among these patients consists of those recipients who developed de novo donor-specific antibody (dnDSA) to one of the HLA mismatches but not the other mismatch. These patients represent a unique cohort in which each patient serves as its own control, where all external variables (such as levels of immunosuppression; other immune genes; gender; age; and other environmental exposures) are held constant, and the only variable is the quality of the HLA allele mismatch. One allele is clearly more immunogenic as it led to generation of dnDSA, and the other allele is evidently less immunogenic because it did not lead to DSA formation, even though the patient's immune system was robust enough to generate a response against the other mismatch. This cohort, studied in Tambur (2019), clearly showed that the more immunogenic allele was not always the allele with the highest mismatches, counted by HLA Matchmaker. Follow-up studies suggest that evolutionary and functional divergence of the mismatched alleles from the recipient's own HLA background is more aligned with generation of dnDSA (Maguire et al., 2024). While this line of investigation must be confirmed by others, the logic behind it is in par with our understanding of the evolution of the HLA system, its extra ordinary polymorphism, and the natural selection processes that took place primarily due to infectious pathogens (e.g. Hill, 1991). It stands to reason that some HLA alleles diverged in common paths, responding to similar selection pressure, while others diverged in opposing paths. The more immunologically divergent HLA alleles are, the more likely they are to be recognised as foreign.

I therefore believe that the role of H&I community is to first and foremost understand the evolutionary divergence within the HLA system, and how it is guiding differential immunogenicity between recipient and donor in the context of transplantation. Only with this fundamental understanding can we build coherent assessment of other genes and processes within the immune response.

The author declares no conflicts of interest.

对审查的评论:形成确定捐赠者兼容性的新视角方法。
Clarke 和 Nadat(2024 年)概述了目前用于检测 HLA 抗原和抗体的技术,并介绍了试图根据 HLA 分型量化移植受者和捐献者之间不相容程度的方法。接着,他们提到了研究抗体质量(如亲和力和热敏性以及糖基化状态)的检测方法,并介绍了研究 T 淋巴细胞和 B 淋巴细胞克隆性和受体汇集的方法。最后,他们简要介绍了评估同种免疫记忆的试验,并提到了一些评估移植物损伤的试验。我对作者为移植免疫学家提供了一份浓缩的试验菜单表示赞赏。免疫机制由数千个基因控制,这些基因驱动着免疫反应的许多变异,无论是对病原体、自身免疫性疾病的易感性,还是对同种异体刺激的易感性。这些基因中的每一个都是通过基本性、冗余性和适应性机制进化和分化而来的,为不同人群在各自的局部威胁下提供最佳保护提供了不同的途径(Quintana-Murci,2019)。这些进化力量还要求在免疫途径中产生冗余途径,以便抑制一种途径不会导致个体/种群消亡。这就意味着,对一种甚至几种途径的检测并不一定与整体的综合反应相关。我们应该进一步考虑,除了 "纯 "免疫基因外,还有其他变量参与协调免疫反应,包括年龄、性别和环境暴露等因素。因此,与免疫活化相关的基因和分子是庞大而多态的。作为组织相容性和免疫遗传学(H&amp;I)专业人士,我们知道大部分适应性免疫反应(至少包括部分先天性免疫反应)都是由个体的特异性 HLA 分子引导的。这些分子控制着我们的胸腺教育,对抗原处理和呈递起着重要作用,并参与免疫激活的最关键步骤。决策树的第一步是 "确定问题"。因此,在同种异体刺激的背景下,我们必须首先了解为什么一个人的免疫系统认为一种 HLA 不匹配的免疫原性更高,而另一种不匹配的免疫原性更低。根据这一原理,Rene Duquesnoy 带来的变革性软件--HLA Matchmaker--试图提供一个组织不相容风险分层的数字指标。我们社区的成员匆忙采用了这一方法,屈从于表位一词的口语化用法及其隐含的免疫意义。不幸的是,当我们对这种方法的免疫学基础提出质疑时,却发现它存在很大的局限性(Tambur &amp; Das, 2023)。在分析接受了在特定位点上有两个 HLA 错配的供体的个体患者时(参考示例中为 DQ;Tambur,2019 年),可以明显看出 HLA Matchmaker 原理的基本缺陷。这些患者中的信息队列包括对其中一个 HLA 错配而非另一个错配产生新的供体特异性抗体 (dnDSA) 的受者。这些患者代表了一个独特的队列,其中每个患者都是自己的对照组,所有外部变量(如免疫抑制水平、其他免疫基因、性别、年龄和其他环境暴露)都保持不变,唯一的变量就是 HLA 等位基因错配的质量。其中一个等位基因的免疫原性显然更高,因为它会导致产生 dnDSA,而另一个等位基因的免疫原性显然更低,因为它不会导致 DSA 的形成,尽管患者的免疫系统足够强大,能够对另一个错配产生反应。Tambur(2019)研究的这个队列清楚地表明,根据HLA Matchmaker的统计,免疫原性更强的等位基因并不总是错配率最高的等位基因。后续研究表明,错配等位基因与受者自身HLA背景的进化和功能分化与dnDSA的产生更为一致(Maguire等人,2024年)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
4.70
自引率
0.00%
发文量
48
审稿时长
6-12 weeks
期刊介绍: The International Journal of Immunogenetics (formerly European Journal of Immunogenetics) publishes original contributions on the genetic control of components of the immune system and their interactions in both humans and experimental animals. The term ''genetic'' is taken in its broadest sense to include studies at the evolutionary, molecular, chromosomal functional and population levels in both health and disease. Examples are: -studies of blood groups and other surface antigens- cell interactions and immune response- receptors, antibodies, complement components and cytokines- polymorphism- evolution of the organisation, control and function of immune system components- anthropology and disease associations- the genetics of immune-related disease: allergy, autoimmunity, immunodeficiency and other immune pathologies- All papers are seen by at least two independent referees and only papers of the highest quality are accepted.
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