Native freshwater lake microbial community response to an in situ experimental dilbit spill.

IF 3.5 3区 生物学 Q2 MICROBIOLOGY
Gurpreet S Kharey, V. Palace, L. Whyte, Charles W. Greer
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Abstract

With the increase in crude oil transport throughout Canada, the potential for spills into freshwater ecosystems has increased and additional research is needed in these sensitive environments. Large enclosures erected in a lake were used as mesocosms for this controlled experimental dilbit (diluted bitumen) spill under ambient environmental conditions. The microbial response to dilbit, the efficacy of standard remediation protocols on different shoreline types commonly found in Canadian freshwater lakes, including a testing of a shoreline washing agent were all evaluated. We found that the native microbial community did not undergo any significant shifts in composition after exposure to dilbit or the ensuing remediation treatments. Regardless of the treatment, sample type (soil, sediment, or water), or type of associated shoreline, the community remained relatively consistent over a 3-month monitoring period. Following this, metagenomic analysis of polycyclic aromatic and alkane hydrocarbon degradation mechanisms also showed that while many key genes identified in PAH and alkane biodegradation were present, their abundance did not change significantly over the course of the experiment. These results showed that the native microbial community present in a pristine freshwater lake has the prerequisite mechanisms for hydrocarbon degradation in place, and combined with standard remediation practices in use in Canada, has the genetic potential and resilience to potentially undertake bioremediation.
原生淡水湖微生物群落对原位实验性稀释比特溢出的反应。
随着加拿大各地原油运输量的增加,泄漏到淡水生态系统中的可能性也在增加,因此需要对这些敏感环境进行更多的研究。在环境条件下,在湖泊中搭建的大型围栏被用作稀释沥青泄漏控制实验的中样。我们评估了微生物对稀释沥青的反应、标准修复方案对加拿大淡水湖常见的不同湖岸类型的功效,包括对湖岸清洗剂的测试。我们发现,在接触稀释比特或随后的修复处理后,本地微生物群落的组成没有发生任何重大变化。无论处理方法、样本类型(土壤、沉积物或水)或相关海岸线类型如何,在 3 个月的监测期内,群落都保持了相对一致。随后,对多环芳烃和烷烃降解机制的元基因组分析也显示,虽然多环芳烃和烷烃生物降解中的许多关键基因都存在,但它们的丰度在实验过程中并没有发生显著变化。这些结果表明,存在于原始淡水湖中的本地微生物群落具有碳氢化合物降解的先决机制,结合加拿大使用的标准修复方法,具有进行生物修复的遗传潜力和恢复能力。
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来源期刊
FEMS microbiology ecology
FEMS microbiology ecology 生物-微生物学
CiteScore
7.50
自引率
2.40%
发文量
132
审稿时长
3 months
期刊介绍: FEMS Microbiology Ecology aims to ensure efficient publication of high-quality papers that are original and provide a significant contribution to the understanding of microbial ecology. The journal contains Research Articles and MiniReviews on fundamental aspects of the ecology of microorganisms in natural soil, aquatic and atmospheric habitats, including extreme environments, and in artificial or managed environments. Research papers on pure cultures and in the areas of plant pathology and medical, food or veterinary microbiology will be published where they provide valuable generic information on microbial ecology. Papers can deal with culturable and non-culturable forms of any type of microorganism: bacteria, archaea, filamentous fungi, yeasts, protozoa, cyanobacteria, algae or viruses. In addition, the journal will publish Perspectives, Current Opinion and Controversy Articles, Commentaries and Letters to the Editor on topical issues in microbial ecology. - Application of ecological theory to microbial ecology - Interactions and signalling between microorganisms and with plants and animals - Interactions between microorganisms and their physicochemical enviornment - Microbial aspects of biogeochemical cycles and processes - Microbial community ecology - Phylogenetic and functional diversity of microbial communities - Evolutionary biology of microorganisms
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