Deep Canonical Correlation Fusion Algorithm Based on Denoising Autoencoder for ASD Diagnosis and Pathogenic Brain Region Identification

IF 3.9 2区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Huilian Zhang, Jie Chen, Bo Liao, Fang-xiang Wu, Xia-an Bi
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引用次数: 0

Abstract

Autism Spectrum Disorder (ASD) is defined as a neurodevelopmental condition distinguished by unconventional neural activities. Early intervention is key to managing the progress of ASD, and current research primarily focuses on the use of structural magnetic resonance imaging (sMRI) or resting-state functional magnetic resonance imaging (rs-fMRI) for diagnosis. Moreover, the use of autoencoders for disease classification has not been sufficiently explored. In this study, we introduce a new framework based on autoencoder, the Deep Canonical Correlation Fusion algorithm based on Denoising Autoencoder (DCCF-DAE), which proves to be effective in handling high-dimensional data. This framework involves efficient feature extraction from different types of data with an advanced autoencoder, followed by the fusion of these features through the DCCF model. Then we utilize the fused features for disease classification. DCCF integrates functional and structural data to help accurately diagnose ASD and identify critical Regions of Interest (ROIs) in disease mechanisms. We compare the proposed framework with other methods by the Autism Brain Imaging Data Exchange (ABIDE) database and the results demonstrate its outstanding performance in ASD diagnosis. The superiority of DCCF-DAE highlights its potential as a crucial tool for early ASD diagnosis and monitoring.

Graphical Abstract

Abstract Image

基于去噪自编码器的深度典型相关融合算法用于 ASD 诊断和致病脑区识别
自闭症谱系障碍(ASD)被定义为一种以非常规神经活动为特征的神经发育疾病。早期干预是控制自闭症进展的关键,目前的研究主要集中在使用结构磁共振成像(sMRI)或静息态功能磁共振成像(rs-fMRI)进行诊断。此外,使用自编码器进行疾病分类的研究还不够深入。在本研究中,我们介绍了一种基于自编码器的新框架,即基于去噪自编码器的深度典范相关融合算法(DCCF-DAE),事实证明它能有效处理高维数据。该框架包括利用先进的自动编码器从不同类型的数据中高效提取特征,然后通过 DCCF 模型融合这些特征。然后,我们利用融合后的特征进行疾病分类。DCCF 整合了功能和结构数据,有助于准确诊断 ASD 并识别疾病机制中的关键感兴趣区 (ROI)。我们通过自闭症脑成像数据交换(ABIDE)数据库将所提出的框架与其他方法进行了比较,结果表明其在 ASD 诊断中表现出色。DCCF-DAE 的优越性凸显了它作为早期 ASD 诊断和监测的重要工具的潜力。
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来源期刊
Interdisciplinary Sciences: Computational Life Sciences
Interdisciplinary Sciences: Computational Life Sciences MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
8.60
自引率
4.20%
发文量
55
期刊介绍: Interdisciplinary Sciences--Computational Life Sciences aims to cover the most recent and outstanding developments in interdisciplinary areas of sciences, especially focusing on computational life sciences, an area that is enjoying rapid development at the forefront of scientific research and technology. The journal publishes original papers of significant general interest covering recent research and developments. Articles will be published rapidly by taking full advantage of internet technology for online submission and peer-reviewing of manuscripts, and then by publishing OnlineFirstTM through SpringerLink even before the issue is built or sent to the printer. The editorial board consists of many leading scientists with international reputation, among others, Luc Montagnier (UNESCO, France), Dennis Salahub (University of Calgary, Canada), Weitao Yang (Duke University, USA). Prof. Dongqing Wei at the Shanghai Jiatong University is appointed as the editor-in-chief; he made important contributions in bioinformatics and computational physics and is best known for his ground-breaking works on the theory of ferroelectric liquids. With the help from a team of associate editors and the editorial board, an international journal with sound reputation shall be created.
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