Genome-wide identification and expression analysis of the Nitrile-specifier proteins (NSPs) in Brassica napus

IF 5.4 Q1 PLANT SCIENCES
Tingting Zhai , Jun Teng , Mengjie Gu , Yanjiao Wang , Ke Qu , Wei Yang , Shuxin Zhang
{"title":"Genome-wide identification and expression analysis of the Nitrile-specifier proteins (NSPs) in Brassica napus","authors":"Tingting Zhai ,&nbsp;Jun Teng ,&nbsp;Mengjie Gu ,&nbsp;Yanjiao Wang ,&nbsp;Ke Qu ,&nbsp;Wei Yang ,&nbsp;Shuxin Zhang","doi":"10.1016/j.cpb.2024.100342","DOIUrl":null,"url":null,"abstract":"<div><p>The complete exploitation of <em>Brassica napus</em> plants is a study hotspot, since it is an essential oil crop that is widely cultivated across the world. Glucosinolate is a unique secondary metabolite in the <em>Brassicaceae</em> family, and its content has a substantial influence on rapeseed development and quality. Its degradation products have various physiological functions, among which Nitrile specific proteins (NSPs) can hydrolyze glucosinolate and hence influence the balance of plant immunity and growth. However, the related gene families in <em>B. napus</em> have not been investigated. Here, 72 NSP family members were discovered and described in <em>B. napus</em> based on their sequence structures, physiological correlations, phonological locations, and expression levels. According to collinearity studies, the NSP proteins in <em>B. napus</em> and <em>A. thaliana</em> are closely related. Analysis of <em>BnNSP</em> expression patterns in various tissues revealed that <em>BnNSPs</em> exhibit high tissue specificity, implying that <em>BnNSPs</em> may play distinguish functions in various developmental phases. We discovered that NSPs may be regulated by hormones such as abscisic acid (ABA), gibberellin (GA), and metallic jasmonate (MeJA) based on the expression of <em>NSPs</em> during hormone treatment. The results provide valuable information for the future functional characterization of <em>BnNSP</em> genes.</p></div>","PeriodicalId":38090,"journal":{"name":"Current Plant Biology","volume":null,"pages":null},"PeriodicalIF":5.4000,"publicationDate":"2024-04-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2214662824000240/pdfft?md5=5b8c6fc3c4afb0dd2cbbda915506acd4&pid=1-s2.0-S2214662824000240-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Plant Biology","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2214662824000240","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0

Abstract

The complete exploitation of Brassica napus plants is a study hotspot, since it is an essential oil crop that is widely cultivated across the world. Glucosinolate is a unique secondary metabolite in the Brassicaceae family, and its content has a substantial influence on rapeseed development and quality. Its degradation products have various physiological functions, among which Nitrile specific proteins (NSPs) can hydrolyze glucosinolate and hence influence the balance of plant immunity and growth. However, the related gene families in B. napus have not been investigated. Here, 72 NSP family members were discovered and described in B. napus based on their sequence structures, physiological correlations, phonological locations, and expression levels. According to collinearity studies, the NSP proteins in B. napus and A. thaliana are closely related. Analysis of BnNSP expression patterns in various tissues revealed that BnNSPs exhibit high tissue specificity, implying that BnNSPs may play distinguish functions in various developmental phases. We discovered that NSPs may be regulated by hormones such as abscisic acid (ABA), gibberellin (GA), and metallic jasmonate (MeJA) based on the expression of NSPs during hormone treatment. The results provide valuable information for the future functional characterization of BnNSP genes.

全基因组范围内甘蓝型油菜腈指定蛋白(NSP)的鉴定和表达分析
芸苔属植物是一种重要的油料作物,在世界各地广泛种植,因此其完全开发利用是一个研究热点。葡萄糖苷酸是十字花科植物中一种独特的次级代谢产物,其含量对油菜籽的生长发育和品质有很大影响。其降解产物具有多种生理功能,其中腈特异性蛋白(NSPs)可水解葡萄糖苷酸,从而影响植物免疫和生长的平衡。然而,人们尚未对油菜中的相关基因家族进行研究。本文根据其序列结构、生理相关性、发音位置和表达水平,发现并描述了72个NSP家族成员。根据相关性研究,油菜中的 NSP 蛋白与 A. thaliana 中的 NSP 蛋白密切相关。对 BnNSP 在不同组织中的表达模式分析发现,BnNSPs 表现出高度的组织特异性,这意味着 BnNSPs 可能在不同发育阶段发挥不同的功能。根据激素处理过程中 NSPs 的表达,我们发现 NSPs 可能受脱落酸(ABA)、赤霉素(GA)和金属茉莉酸盐(MeJA)等激素的调控。这些结果为今后 BnNSP 基因的功能鉴定提供了有价值的信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Current Plant Biology
Current Plant Biology Agricultural and Biological Sciences-Plant Science
CiteScore
10.90
自引率
1.90%
发文量
32
审稿时长
50 days
期刊介绍: Current Plant Biology aims to acknowledge and encourage interdisciplinary research in fundamental plant sciences with scope to address crop improvement, biodiversity, nutrition and human health. It publishes review articles, original research papers, method papers and short articles in plant research fields, such as systems biology, cell biology, genetics, epigenetics, mathematical modeling, signal transduction, plant-microbe interactions, synthetic biology, developmental biology, biochemistry, molecular biology, physiology, biotechnologies, bioinformatics and plant genomic resources.
文献相关原料
公司名称 产品信息 采购帮参考价格
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信