EXPLORATION OF THE ACTIVE COMPOUNDS OF MORINGA OLEIFERA LAM AS HIV-1 REVERSE TRANSCRIPTASE INHIBITOR: A NETWORK PHARMACOLOGY AND MOLECULAR DOCKING APPROACH

Melanda Fitriana, Abdul MUN’IM, Firdayani, Wirawan Adikusuma
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Abstract

Objective: This study aims to predict the active compound of Moringa oleifera for the treatment of Human Immunodeficiency Virus (HIV), specifically targeting the HIV-1 reverse transcriptase (HIV-1 RT) enzyme using network pharmacology and molecular docking approach. Methods: The active ingredients of M. oleifera, were screened from the Knapsack database. Subsequently, HIV-1 RT and its related target compounds were retrieved from the Genecard database. The analysis of common targets involved protein-protein interactions (PPI) analysis using string databases and constructing interaction IDs using Cytoscape software. Gene Ontology (GO) functional and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed. Molecular docking studies were conducted using AutoDock Vina software to validate the results of the network pharmacological analysis. Results: A total of 63 active ingredients and 8601 targets related to HIV-1 RT were identified. The network analysis, encompassing GO and KEGG enrichment, revealed strong associations of common targets with key signaling pathways such as Tumor Necrosis Factor (TNF), Toll Like Receptor (TLR), and apoptosis. Additionally, 11 compounds of M. oleifera including apigenin, benzyl isothiocyanate, benzylamine, caffeic acid, ferulic acid, epicatechin, kaempferol, gallic acid, luteolin, syringic acid and vanillin were identified as potential vital compounds. Molecular docking analysis highlighted apigenin and kaempferol as the most promising compounds, exhibiting the lowest binding affinity to the HIV-1 RT enzyme. These compounds correlated with caspase-3(CASP3), caspase-9 (CASP9), and BCL2 Apoptosis Regulator (BAX) protein, stimulating cell apoptosis through multiple pathways.  Conclusion: The study highlighted that apigenin and kaempferol are potential compound of M. oleifera in HIV-1 treatment through inhibition activity at HIV-1 RT Enzyme.
探索作为 HIV-1 逆转录酶抑制剂的 Moringa oleifera lam 活性化合物:一种网络药理学和分子对接方法
研究目的本研究旨在利用网络药理学和分子对接方法预测油杉属植物治疗人类免疫缺陷病毒(HIV)的活性化合物,特别是针对 HIV-1 逆转录酶(HIV-1 RT)的活性化合物:方法:从 Knapsack 数据库中筛选出 M. oleifera 的活性成分。随后,从 Genecard 数据库中检索了 HIV-1 RT 及其相关靶标化合物。共同靶标的分析包括使用字符串数据库进行蛋白质-蛋白质相互作用(PPI)分析,以及使用 Cytoscape 软件构建相互作用 ID。还进行了基因本体(GO)功能分析和京都基因组百科全书(KEGG)通路分析。使用 AutoDock Vina 软件进行了分子对接研究,以验证网络药理学分析的结果:结果:共鉴定出 63 种活性成分和 8601 个与 HIV-1 RT 相关的靶点。网络分析包括 GO 和 KEGG 富集,揭示了共同靶点与肿瘤坏死因子 (TNF)、Toll Like Receptor (TLR) 和细胞凋亡等关键信号通路的紧密联系。此外,油橄榄中的 11 种化合物(包括芹菜素、异硫氰酸苄酯、苄胺、咖啡酸、阿魏酸、表儿茶素、山柰醇、没食子酸、木犀草素、丁香酸和香兰素)被鉴定为潜在的重要化合物。分子对接分析显示,芹菜素和山奈酚是最有潜力的化合物,它们与 HIV-1 RT 酶的结合亲和力最低。这些化合物与 Caspase-3(CASP3)、Caspase-9(CASP9)和 BCL2 凋亡调节蛋白(BAX)相关,通过多种途径刺激细胞凋亡。结论该研究强调,油橄榄中的芹菜甙元和山奈酚通过抑制 HIV-1 RT 酶的活性,是治疗 HIV-1 的潜在化合物。
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