Taxonomic interpretation of non-heterocystous Cyanobacteria (Oscillatoriales) from eastern India with particular emphasis on Lyngbya Plectonema complex
{"title":"Taxonomic interpretation of non-heterocystous Cyanobacteria (Oscillatoriales) from eastern India with particular emphasis on Lyngbya Plectonema complex","authors":"S. Banerjee, Akanksha Singh, Ruma Pal","doi":"10.21931/rb/2024.09.01.66","DOIUrl":null,"url":null,"abstract":"Filamentous non-heterocystous cyanobacterial taxa from 8 genera were collected from different ecological niches like high altitudes, plains and estuaries of eastern India. The systematic accounts of 23 taxa were investigated with a polyphasic approach considering morpho taxonomy, cultural behavior, and molecular phylogenetic analysis with 16S and 16S-23S Internal Transcribed Spacer (ITS) regions as molecular markers. The collected taxa were from the families Oscillatoriaceae, Phormidiaceae and Pseudanabaenaceae with 8 representative genera viz. Lyngbya, Plectonema, Oscillatoria, Limnothrix, Leptolyngbya, Planktothrix, Desertifilum and Phormidium. The 16S-23S ITS region-based molecular characterization of 13 species from Oscillatoriaceae, 6 species from Phormidiaceae, and 4 species from Pseudanabaenaceae were found to be congruent with earlier phylogenetic studies using other markers. Phylogenetic tree analysis revealed habitat-specific clustering of ITS sequences of the investigated taxa. The 16S molecular marker-based phylogenetic analysis, along with cultural studies of the Lyngbya-Plectonema clade, highlighted the need for morphotaxonomic reconsideration of Lyngbya birgei and Plectonema tomasinianum related to the formation of false branching. The present study affirmed that 98% sequence similarity in the ITS region can be considered as a threshold percentage for conspecificity determination in the Lyngbya genus.\n \n \nKeywords: Cyanobacteria; ITS; Oscillatoriaceae; Phormidiaceae; Phylogenetic tree; Pseudanabaenaceae.","PeriodicalId":505112,"journal":{"name":"Bionatura","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-03-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bionatura","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.21931/rb/2024.09.01.66","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
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Abstract
Filamentous non-heterocystous cyanobacterial taxa from 8 genera were collected from different ecological niches like high altitudes, plains and estuaries of eastern India. The systematic accounts of 23 taxa were investigated with a polyphasic approach considering morpho taxonomy, cultural behavior, and molecular phylogenetic analysis with 16S and 16S-23S Internal Transcribed Spacer (ITS) regions as molecular markers. The collected taxa were from the families Oscillatoriaceae, Phormidiaceae and Pseudanabaenaceae with 8 representative genera viz. Lyngbya, Plectonema, Oscillatoria, Limnothrix, Leptolyngbya, Planktothrix, Desertifilum and Phormidium. The 16S-23S ITS region-based molecular characterization of 13 species from Oscillatoriaceae, 6 species from Phormidiaceae, and 4 species from Pseudanabaenaceae were found to be congruent with earlier phylogenetic studies using other markers. Phylogenetic tree analysis revealed habitat-specific clustering of ITS sequences of the investigated taxa. The 16S molecular marker-based phylogenetic analysis, along with cultural studies of the Lyngbya-Plectonema clade, highlighted the need for morphotaxonomic reconsideration of Lyngbya birgei and Plectonema tomasinianum related to the formation of false branching. The present study affirmed that 98% sequence similarity in the ITS region can be considered as a threshold percentage for conspecificity determination in the Lyngbya genus.
Keywords: Cyanobacteria; ITS; Oscillatoriaceae; Phormidiaceae; Phylogenetic tree; Pseudanabaenaceae.