Reconstruction of Ancestral Genomes as a Key to Understanding the Early Evolution of Vertebrate Genotype

Pub Date : 2023-12-01 DOI:10.1134/s1062360423070020
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Abstract

The hypothesis about whole-genome duplications as the most important driver of transformation of the structure plan and lifestyle of vertebrates at the early stages of their evolution is generally accepted today. At the same time, details such as the timing and mechanisms of these duplications still remain controversial. Research into issues of periodization, number, and in which evolutionary lineages rounds of whole-genome and/or local duplications occurred in vertebrates continues as methodology and technical capabilities develop. The role of high-throughput genomic sequencing and big data analysis is increasing, which makes it possible to identify and track the history of not only individual genes or their families but of large sections of the genome, including at the chromosomal level. New opportunities allow for considering the problem at the macro level and conduct a comparative analysis of the genomic characteristics of representatives of different evolutionary groups. In this article, which is a logical continuation of an earlier review article (in 2020), the authors make an attempt to review and summarize the data of recent years, largely related to the sequencing of genomes of representatives of evolutionarily ancient (basal) groups of vertebrates and to understand the contribution of this new information to our ideas about the early evolutionary history of the vertebrate genotype. According to new data, the divergence and observed significant differences in the morphological plans of the two evolutionary lineages of vertebrates could be ensured by different scenarios of polyploidization of their genomes.

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重建祖先基因组是了解脊椎动物基因型早期进化的关键
摘要 关于全基因组复制是脊椎动物进化早期阶段结构规划和生活方式转变的最重要驱动力的假说如今已被普遍接受。与此同时,关于这些复制的时间和机制等细节仍然存在争议。随着研究方法和技术能力的发展,有关脊椎动物全基因组和/或局部复制的周期、数量以及发生在哪个进化系的问题的研究仍在继续。高通量基因组测序和大数据分析的作用越来越大,不仅可以识别和追踪单个基因或其家族的历史,还可以识别和追踪基因组大片段(包括染色体水平)的历史。新的机遇使得我们可以从宏观层面考虑问题,并对不同进化群体代表的基因组特征进行比较分析。本文是早先一篇综述文章(2020 年)的逻辑延续,作者试图回顾和总结近年来主要与进化古老(基干)脊椎动物类群代表基因组测序有关的数据,并了解这些新信息对我们关于脊椎动物基因型早期进化史的想法的贡献。根据新的数据,脊椎动物两个进化系形态图谱的分化和观察到的显著差异可能是由其基因组的多倍体化的不同情况所保证的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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