Poly(A) tale: From A to A; RNA polyadenylation in prokaryotes and eukaryotes.

IF 6.4 2区 生物学 Q1 CELL BIOLOGY
Ahmadreza Mofayezi, Mahdieh Jadaliha, Fatemeh-Zahra Zangeneh, Vahid Khoddami
{"title":"Poly(A) tale: From A to A; RNA polyadenylation in prokaryotes and eukaryotes.","authors":"Ahmadreza Mofayezi, Mahdieh Jadaliha, Fatemeh-Zahra Zangeneh, Vahid Khoddami","doi":"10.1002/wrna.1837","DOIUrl":null,"url":null,"abstract":"<p><p>Most eukaryotic mRNAs and different non-coding RNAs undergo a form of 3' end processing known as polyadenylation. Polyadenylation machinery is present in almost all organisms except few species. In bacteria, the machinery has evolved from PNPase, which adds heteropolymeric tails, to a poly(A)-specific polymerase. Differently, a complex machinery for accurate polyadenylation and several non-canonical poly(A) polymerases are developed in eukaryotes. The role of poly(A) tail has also evolved from serving as a degradative signal to a stabilizing modification that also regulates translation. In this review, we discuss poly(A) tail emergence in prokaryotes and its development into a stable, yet dynamic feature at the 3' end of mRNAs in eukaryotes. We also describe how appearance of novel poly(A) polymerases gives cells flexibility to shape poly(A) tail. We explain how poly(A) tail dynamics help regulate cognate RNA metabolism in a context-dependent manner, such as during oocyte maturation. Finally, we describe specific mRNAs in metazoans that bear stem-loops instead of poly(A) tails. We conclude with how recent discoveries about poly(A) tail can be applied to mRNA technology. This article is categorized under: RNA Evolution and Genomics > RNA and Ribonucleoprotein Evolution RNA Processing > 3' End Processing RNA Turnover and Surveillance > Regulation of RNA Stability.</p>","PeriodicalId":23886,"journal":{"name":"Wiley Interdisciplinary Reviews: RNA","volume":"15 2","pages":"e1837"},"PeriodicalIF":6.4000,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Wiley Interdisciplinary Reviews: RNA","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1002/wrna.1837","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CELL BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Most eukaryotic mRNAs and different non-coding RNAs undergo a form of 3' end processing known as polyadenylation. Polyadenylation machinery is present in almost all organisms except few species. In bacteria, the machinery has evolved from PNPase, which adds heteropolymeric tails, to a poly(A)-specific polymerase. Differently, a complex machinery for accurate polyadenylation and several non-canonical poly(A) polymerases are developed in eukaryotes. The role of poly(A) tail has also evolved from serving as a degradative signal to a stabilizing modification that also regulates translation. In this review, we discuss poly(A) tail emergence in prokaryotes and its development into a stable, yet dynamic feature at the 3' end of mRNAs in eukaryotes. We also describe how appearance of novel poly(A) polymerases gives cells flexibility to shape poly(A) tail. We explain how poly(A) tail dynamics help regulate cognate RNA metabolism in a context-dependent manner, such as during oocyte maturation. Finally, we describe specific mRNAs in metazoans that bear stem-loops instead of poly(A) tails. We conclude with how recent discoveries about poly(A) tail can be applied to mRNA technology. This article is categorized under: RNA Evolution and Genomics > RNA and Ribonucleoprotein Evolution RNA Processing > 3' End Processing RNA Turnover and Surveillance > Regulation of RNA Stability.

Abstract Image

Poly(A)故事:从 A 到 A;原核生物和真核生物中的 RNA 多腺苷酸化。
大多数真核生物 mRNA 和不同的非编码 RNA 都要经过一种称为多聚腺苷酸化的 3' 端加工。除少数物种外,几乎所有生物都存在多腺苷酸化机制。在细菌中,该机制已从添加杂聚尾的 PNP 酶进化为聚(A)特异性聚合酶。与此不同的是,真核生物中出现了一种用于精确多腺苷酸化的复杂机制和几种非规范的聚(A)聚合酶。聚(A)尾的作用也从降解信号演变为稳定修饰,同时还能调节翻译。在这篇综述中,我们将讨论多聚(A)尾在原核生物中的出现及其在真核生物中发展成为 mRNA 3' 端稳定而又动态的特征。我们还描述了新型多聚(A)聚合酶的出现如何赋予细胞塑造多聚(A)尾的灵活性。我们解释了 poly(A) 尾部的动态如何帮助调节同源 RNA 代谢,而这种调节方式与具体情况有关,例如在卵母细胞成熟过程中。最后,我们描述了元虫中带有茎环而非 poly(A) 尾的特定 mRNA。最后,我们介绍了如何将最近发现的多聚(A)尾应用于 mRNA 技术。本文归类于RNA 进化与基因组学 > RNA 与核糖核蛋白进化 RNA 处理 > 3' 端处理 RNA 更替与监控 > RNA 稳定性调控。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
14.80
自引率
4.10%
发文量
67
审稿时长
6-12 weeks
期刊介绍: WIREs RNA aims to provide comprehensive, up-to-date, and coherent coverage of this interesting and growing field, providing a framework for both RNA experts and interdisciplinary researchers to not only gain perspective in areas of RNA biology, but to generate new insights and applications as well. Major topics to be covered are: RNA Structure and Dynamics; RNA Evolution and Genomics; RNA-Based Catalysis; RNA Interactions with Proteins and Other Molecules; Translation; RNA Processing; RNA Export/Localization; RNA Turnover and Surveillance; Regulatory RNAs/RNAi/Riboswitches; RNA in Disease and Development; and RNA Methods.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信