Intra and inter-regional functional connectivity of the human brain due to Task-Evoked fMRI Data classification through CNN & LSTM

IF 3 3区 医学 Q2 CLINICAL NEUROLOGY
Haniyeh Kaheni , Mohammad Bagher Shiran Ph.D. , Seyed Kamran Kamrava M.D. , Arash Zare-Sadeghi Ph.D.
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Abstract

Background and purpose

Olfaction is an early marker of neurodegenerative disease. Standard olfactory function is essential due to the importance of olfaction in human life. The psychophysical evaluation assesses the olfactory function commonly. It is patient-reported, and results rely on the patient's answers and collaboration. However, methodological difficulties attributed to the psychophysical evaluation of olfactory-related cerebral areas led to limited assessment of olfactory function in the human brain.

Materials and Methods

The current study utilized clustering approaches to assess olfactory function in fMRI data and used brain activity to parcellate the brain with homogeneous properties. Deep neural network architecture based on ResNet convolutional neural networks (CNN) and Long Short-Term Model (LSTM) designed to classify healthy with olfactory disorders subjects.

Results

The fMRI result obtained by k-means unsupervised machine learning model was within the expected outcome and similar to those found with the conn toolbox in detecting active areas. There was no significant difference between the means of subjects and every subject. Proposing a CRNN deep learning model to classify fMRI data in two different healthy and with olfactory disorders groups leads to an accuracy score of 97 %.

Conclusions

The K-means unsupervised algorithm can detect the active regions in the brain and analyze olfactory function. Classification results prove the CNN-LSTM architecture using ResNet provides the best accuracy score in olfactory fMRI data. It is the first attempt conducted on olfactory fMRI data in detail until now.

Abstract Image

通过 CNN 和 LSTM 对任务诱发的 fMRI 数据进行分类,研究人脑内部和区域间的功能连接。
背景和目的:嗅觉是神经退行性疾病的早期标志。由于嗅觉在人类生活中的重要性,标准的嗅觉功能至关重要。心理物理评估通常用于评估嗅觉功能。它由患者报告,结果依赖于患者的回答和合作。然而,由于嗅觉相关脑区的心理物理评估在方法上存在困难,导致对人脑嗅觉功能的评估有限:目前的研究利用聚类方法来评估 fMRI 数据中的嗅觉功能,并利用大脑活动来划分具有同质特性的大脑。基于 ResNet 卷积神经网络(CNN)和长短期模型(LSTM)设计的深度神经网络架构用于对健康与嗅觉障碍受试者进行分类:通过 k-means 无监督机器学习模型获得的 fMRI 结果符合预期,在检测活跃区域方面与使用 conn 工具箱发现的结果相似。受试者和每个受试者的平均值之间没有明显差异。采用 CRNN 深度学习模型对两个不同的健康组和嗅觉障碍组的 fMRI 数据进行分类,准确率达到 97%:结论:K-means 无监督算法可以检测大脑中的活跃区域并分析嗅觉功能。分类结果证明,使用 ResNet 的 CNN-LSTM 架构在嗅觉 fMRI 数据中的准确率最高。这是迄今为止对嗅觉 fMRI 数据进行的首次详细尝试。
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来源期刊
Journal of Neuroradiology
Journal of Neuroradiology 医学-核医学
CiteScore
6.10
自引率
5.70%
发文量
142
审稿时长
6-12 weeks
期刊介绍: The Journal of Neuroradiology is a peer-reviewed journal, publishing worldwide clinical and basic research in the field of diagnostic and Interventional neuroradiology, translational and molecular neuroimaging, and artificial intelligence in neuroradiology. The Journal of Neuroradiology considers for publication articles, reviews, technical notes and letters to the editors (correspondence section), provided that the methodology and scientific content are of high quality, and that the results will have substantial clinical impact and/or physiological importance.
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