Dissecting the genome sequence of a clinical isolated Cunninghamella bertholletiae Z2 strain with rich cytochrome P450 enzymes (Article)

IF 2.6 4区 医学 Q3 INFECTIOUS DISEASES
En-Min Zhou , Xin-Ai Chen , Ming-Ming Zhou , Li-Yao Xu , Di Wang , He-Ping Shen , Wei-Qun Xu
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引用次数: 0

Abstract

Mucormycosis is receiving much more attention because of its high morbidity and extremely high mortality rate in immunosuppressed populations. In this study, we isolated a Cunnignhamella bertholletiae Z2 strain from a skin lesion of a 14 year, 9 months old girl with acute lymphoblastic leukemia who die of infection from the Z2 strain. Genome sequencing was performed after isolation and amplification of the Z2 strain to reveal potential virulence factors and pathogenic mechanisms. The results showed that the genome size of the Z2 strain is 30.9 Mb with 9213 genes. Mucoral specific virulence factor genes found are ARF, CalN, and CoTH, while no gliotoxin biosynthesis gene cluster was found, which is a known virulence factor in Aspergillus fumigatus adapted to the environment. The Z2 strain was found to have 69 cytochrome P450 enzymes, which are potential drug resistant targets. Sensitivity testing of Z2 showed it was only inhibited by amphotericin B and posaconazole. Detailed genomic information of the C. bertholletiae Z2 strain may provide useful data for treatment.

剖析临床分离的具有丰富细胞色素 P450 酶的贝氏杉木菌 Z2 菌株的基因组序列(文章)
粘孢子菌病因其在免疫抑制人群中的高发病率和极高死亡率而受到越来越多的关注。在这项研究中,我们从一名患有急性淋巴细胞白血病的 14 岁 9 个月大的女孩的皮损中分离出了贝氏粘菌 Z2 株,该女孩死于 Z2 株感染。在分离和扩增 Z2 菌株后,进行了基因组测序,以揭示潜在的毒力因子和致病机制。结果显示,Z2 株的基因组大小为 30.9 Mb,共有 9213 个基因。发现的黏膜特异性毒力因子基因有 ARF、CalN 和 CoTH,但没有发现胶质毒素生物合成基因簇,而胶质毒素是烟曲霉适应环境的已知毒力因子。研究发现,Z2 菌株含有 69 种细胞色素 P450 酶,这些酶是潜在的抗药性靶标。对 Z2 菌株的敏感性测试表明,它只受两性霉素 B 和泊沙康唑的抑制。贝氏菌 Z2 株的详细基因组信息可能会为治疗提供有用的数据。
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来源期刊
Infection Genetics and Evolution
Infection Genetics and Evolution 医学-传染病学
CiteScore
8.40
自引率
0.00%
发文量
215
审稿时长
82 days
期刊介绍: (aka Journal of Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases -- MEEGID) Infectious diseases constitute one of the main challenges to medical science in the coming century. The impressive development of molecular megatechnologies and of bioinformatics have greatly increased our knowledge of the evolution, transmission and pathogenicity of infectious diseases. Research has shown that host susceptibility to many infectious diseases has a genetic basis. Furthermore, much is now known on the molecular epidemiology, evolution and virulence of pathogenic agents, as well as their resistance to drugs, vaccines, and antibiotics. Equally, research on the genetics of disease vectors has greatly improved our understanding of their systematics, has increased our capacity to identify target populations for control or intervention, and has provided detailed information on the mechanisms of insecticide resistance. However, the genetics and evolutionary biology of hosts, pathogens and vectors have tended to develop as three separate fields of research. This artificial compartmentalisation is of concern due to our growing appreciation of the strong co-evolutionary interactions among hosts, pathogens and vectors. Infection, Genetics and Evolution and its companion congress [MEEGID](http://www.meegidconference.com/) (for Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases) are the main forum acting for the cross-fertilization between evolutionary science and biomedical research on infectious diseases. Infection, Genetics and Evolution is the only journal that welcomes articles dealing with the genetics and evolutionary biology of hosts, pathogens and vectors, and coevolution processes among them in relation to infection and disease manifestation. All infectious models enter the scope of the journal, including pathogens of humans, animals and plants, either parasites, fungi, bacteria, viruses or prions. The journal welcomes articles dealing with genetics, population genetics, genomics, postgenomics, gene expression, evolutionary biology, population dynamics, mathematical modeling and bioinformatics. We also provide many author benefits, such as free PDFs, a liberal copyright policy, special discounts on Elsevier publications and much more. Please click here for more information on our author services .
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