The cadmium tolerance and bioaccumulation mechanism of Tetratostichococcus sp. P1: insight from transcriptomics analysis.

IF 4.2 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Bioengineered Pub Date : 2024-12-01 Epub Date: 2024-02-20 DOI:10.1080/21655979.2024.2314888
Eri Sahabudin, Shohei Kubo, Muhamad Ali Muhammad Yuzir, Nor'azizi Othman, Fazrena Nadia Md Akhir, Kengo Suzuki, Kohei Yoneda, Yoshiaki Maeda, Iwane Suzuki, Hirofumi Hara, Koji Iwamoto
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引用次数: 0

Abstract

Cadmium (Cd) has become a severe issue in relatively low concentration and attracts expert attention due to its toxicity, accumulation, and biomagnification in living organisms. Cd does not have a biological role and causes serious health issues. Therefore, Cd pollutants should be reduced and removed from the environment. Microalgae have great potential for Cd absorption for waste treatment since they are more environmentally friendly than existing treatment methods and have strong metal sorption selectivity. This study evaluated the tolerance and ability of the microalga Tetratostichococcus sp. P1 to remove Cd ions under acidic conditions and reveal mechanisms based on transcriptomics analysis. The results showed that Tetratostichococcus sp. P1 had a high Cd tolerance that survived under the presence of Cd up to 100 µM, and IC50, the half-maximal inhibitory concentration value, was 57.0 μM, calculated from the change in growth rate based on the chlorophyll content. Long-term Cd exposure affected the algal morphology and photosynthetic pigments of the alga. Tetratostichococcus sp. P1 removed Cd with a maximum uptake of 1.55 mg g-1 dry weight. Transcriptomic analysis revealed the upregulation of the expression of genes related to metal binding, such as metallothionein. Group A, Group B transporters and glutathione, were also found upregulated. While the downregulation of the genes were related to photosynthesis, mitochondria electron transport, ABC-2 transporter, polysaccharide metabolic process, and cell division. This research is the first study on heavy metal bioremediation using Tetratostichococcus sp. P1 and provides a new potential microalga strain for heavy metal removal in wastewater.[Figure: see text]Abbreviations:BP: Biological process; bZIP: Basic Leucine Zipper; CC: Cellular component; ccc1: Ca (II)-sensitive cross complementary 1; Cd: Cadmium; CDF: Cation diffusion facilitator; Chl: Chlorophyll; CTR: Cu TRansporter families; DAGs: Directed acyclic graphs; DEGs: Differentially expressed genes; DVR: Divinyl chlorophyllide, an 8-vinyl-reductase; FPN: FerroportinN; FTIR: Fourier transform infrared; FTR: Fe TRansporter; GO: Gene Ontology; IC50: Growth half maximal inhibitory concentration; ICP: Inductively coupled plasma; MF: molecular function; NRAMPs: Natural resistance-associated aacrophage proteins; OD: Optical density; RPKM: Reads Per Kilobase of Exon Per Million Reads Mapped; VIT1: Vacuolar iron transporter 1 families; ZIPs: Zrt-, Irt-like proteins.

四叠球菌 P1 的镉耐受性和生物累积机制:转录组学分析的启示。
由于镉(Cd)在生物体内的毒性、积累和生物放大作用,镉(Cd)在相对较低的浓度下已成为一个严重问题,并引起了专家的关注。镉没有生物作用,却会导致严重的健康问题。因此,应减少并清除环境中的镉污染物。由于微藻比现有的处理方法更环保,且具有很强的金属吸附选择性,因此微藻在吸收镉处理废物方面具有很大的潜力。本研究评估了微藻 Tetratostichococcus sp. P1 在酸性条件下去除镉离子的耐受性和能力,并基于转录组学分析揭示了其机制。结果表明,Tetratostichococcus sp. P1对镉的耐受性很强,在高达100 µM的镉存在下仍能存活,根据叶绿素含量计算的生长速率变化,IC50(半最大抑制浓度值)为57.0 μM。长期接触镉会影响藻类的形态和光合色素。P1 对镉的最大吸收量为 1.55 mg g-1 干重。转录组分析表明,与金属结合有关的基因(如金属硫蛋白)表达上调。还发现 A 组、B 组转运体和谷胱甘肽的表达也上调了。而与光合作用、线粒体电子传递、ABC-2 转运体、多糖代谢过程和细胞分裂有关的基因则出现下调。图:见正文]缩写:BP:生物过程;bZIP:碱性亮氨酸拉链;CC:细胞成分;ccc1:钙(II)敏感交叉互补 1;Cd:镉;CDF:CDF: 阳离子扩散促进因子; Chl:CTR: Cu TRansporter families; DAGs:有向无环图;DEGs:DVR:二乙烯基叶绿素,一种 8-乙烯基还原酶;FPN:FTIR:傅立叶变换红外光谱;FTR:铁转运体;GO:基因本体论;IC50:生长速度:ICP:电感耦合血浆;MF:分子功能;NRAMPs:与自然抗性相关的嗜酸性粒细胞蛋白;OD:光密度;RPKM:每百万读数映射的每千碱基外显子读数;VIT1:空泡铁转运体 1 家族;ZIPs:Zrt-,Irt-like 蛋白。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Bioengineered
Bioengineered BIOTECHNOLOGY & APPLIED MICROBIOLOGY-
CiteScore
8.20
自引率
28.60%
发文量
1114
审稿时长
17 weeks
期刊介绍: Bioengineered provides a platform for publishing high quality research on any aspect of genetic engineering which involves the generation of recombinant strains (both prokaryote and eukaryote) for beneficial applications in food, medicine, industry, environment and bio-defense.
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