NeuroClick: software for mimicking click reaction to generate drug-like molecules permeating the blood-brain barrier.

IF 3.2 4区 医学 Q3 CHEMISTRY, MEDICINAL
Future medicinal chemistry Pub Date : 2024-03-01 Epub Date: 2024-02-19 DOI:10.4155/fmc-2023-0017
Anastasiia M Isakova, Alexander A Kovalenko, Ekaterina V Skorb, Sergey Shityakov
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引用次数: 0

Abstract

Background: Traditional methods for chemical library generation in virtual screening often impose limitations on the accessible chemical space or produce synthetically irrelevant structures. Incorporating common chemical reactions into generative algorithms could offer significant benefits. Materials & methods: In this study, we developed NeuroClick, a graphical user interface software designed to perform in silico azide-alkyne cycloaddition, a widely utilized synthetic approach in modern medicinal chemistry. Results & conclusion: NeuroClick facilitates the generation and filtering of large combinatorial libraries at a remarkable rate of 10,000 molecules per minute. Moreover, the generated products can be filtered to identify subsets of pharmaceutically relevant compounds based on Lipinski's rule of five and blood-brain barrier permeability prediction. We demonstrate the utility of NeuroClick by generating and filtering several thousand molecules for dopamine D3 receptor ligand screening.

NeuroClick:模仿点击反应生成可渗透血脑屏障的类药物分子的软件。
背景:虚拟筛选中生成化学文库的传统方法往往会对可访问的化学空间造成限制,或产生与合成无关的结构。将常见的化学反应纳入生成算法可带来显著的好处。材料与方法:在本研究中,我们开发了 NeuroClick,这是一款图形用户界面软件,旨在进行叠氮-炔环加成的硅学研究,这是现代药物化学中广泛使用的一种合成方法。结果与结论NeuroClick 能以每分钟 10,000 个分子的惊人速度生成和筛选大型组合库。此外,生成的产品还可以进行筛选,以便根据利宾斯基五项原则和血脑屏障渗透性预测确定与药物相关的化合物子集。我们通过为多巴胺 D3 受体配体筛选生成和筛选数千个分子,展示了 NeuroClick 的实用性。
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来源期刊
Future medicinal chemistry
Future medicinal chemistry CHEMISTRY, MEDICINAL-
CiteScore
5.80
自引率
2.40%
发文量
118
审稿时长
4-8 weeks
期刊介绍: Future Medicinal Chemistry offers a forum for the rapid publication of original research and critical reviews of the latest milestones in the field. Strong emphasis is placed on ensuring that the journal stimulates awareness of issues that are anticipated to play an increasingly central role in influencing the future direction of pharmaceutical chemistry. Where relevant, contributions are also actively encouraged on areas as diverse as biotechnology, enzymology, green chemistry, genomics, immunology, materials science, neglected diseases and orphan drugs, pharmacogenomics, proteomics and toxicology.
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