Trace DNA and its persistence on various surfaces: A long term study investigating the influence of surface type and environmental conditions – Part one, metals

IF 3.2 2区 医学 Q2 GENETICS & HEREDITY
Hilary Arsenault, Agnieszka Kuffel, Niamh Nic Daeid, Alexander Gray
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引用次数: 0

Abstract

It is imperative for proper evidence triage that forensic biologists understand what kind of results to expect from certain evidence types submitted for DNA analysis. The persistence of trace DNA has been insufficiently investigated and there is little data available pertaining to the persistence of DNA in different environmental conditions and on different materials. The goal of this study is to increase the available data on this topic which would, in turn, help forensic biologists manage expectations when submitting specific evidence types for DNA testing.

The work presented herein is a large-scale persistence project aimed to identify trends in the persistence of trace DNA and indicate how different environmental storage conditions and target surface characteristics influence the persistence of cellular and cell free DNA (cfDNA) over time. To eliminate variation within the experiment we used a proxy DNA deposit consisting of a synthetic fingerprint solution, cellular DNA, and/or cfDNA. Samples were collected and analysed from 7 metals over the course of 1 year (27 time points) under 3 different environmental storage conditions.

The results of this experiment show that metal type greatly influences DNA persistence. For instance, copper exhibited an expected poor DNA persistence (up to 4 h) which a purification step did not help increase the DNA yield. Alternatively, DNA can persist for up to a year on lead at levels potentially high enough to allow for forensic DNA testing. Additionally, this study showed that the sample storage environment had no impact on DNA persistence in most cases. When considering DNA type, cfDNA was shown to persist for longer than cellular DNA and persistence as a whole appears to be better when DNA is deposited as mixtures over when deposited alone. Unsurprisingly, it can be expected that DNA recovery rates from trace deposits will decrease over time. However, DNA decay is highly dependent on the metal surface and extremely variable at short time points but slightly less variable as time since deposition increases. This data is intended to add to our understanding of DNA persistence and the factors which affect it.

痕量 DNA 及其在各种表面上的持久性:一项长期研究,调查表面类型和环境条件的影响--第一部分,金属
法医生物学家必须了解提交 DNA 分析的某些证据类型会产生什么样的结果,这样才能对证据进行适当的分流。对痕量 DNA 的持久性研究不足,有关 DNA 在不同环境条件和不同材料上的持久性的数据也很少。本文介绍的工作是一个大规模的持久性项目,旨在确定痕量 DNA 的持久性趋势,并说明不同的环境储存条件和目标表面特征如何影响细胞和游离细胞 DNA(cfDNA)的持久性。为了消除实验中的差异,我们使用了由合成指纹溶液、细胞 DNA 和/或 cfDNA 组成的替代 DNA 沉积物。实验结果表明,金属类型对 DNA 的持久性有很大影响。例如,铜的 DNA 持久性较差(最长 4 小时),纯化步骤无助于提高 DNA 的产量。而铅的 DNA 持久性可长达一年,其含量可能高到足以进行法医 DNA 检测。此外,这项研究还表明,在大多数情况下,样本的储存环境对 DNA 的持久性没有影响。在考虑 DNA 类型时,cfDNA 的持久性比细胞 DNA 更长,而且 DNA 以混合物形式存放时的整体持久性似乎比单独存放时更好。不难理解,从痕量沉积物中提取 DNA 的回收率会随着时间的推移而降低。不过,DNA 的衰变与金属表面有很大关系,在短时间内变化极大,但随着沉积时间的延长,其变化会稍小一些。这些数据旨在加深我们对 DNA 持久性及其影响因素的了解。
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来源期刊
CiteScore
7.50
自引率
32.30%
发文量
132
审稿时长
11.3 weeks
期刊介绍: Forensic Science International: Genetics is the premier journal in the field of Forensic Genetics. This branch of Forensic Science can be defined as the application of genetics to human and non-human material (in the sense of a science with the purpose of studying inherited characteristics for the analysis of inter- and intra-specific variations in populations) for the resolution of legal conflicts. The scope of the journal includes: Forensic applications of human polymorphism. Testing of paternity and other family relationships, immigration cases, typing of biological stains and tissues from criminal casework, identification of human remains by DNA testing methodologies. Description of human polymorphisms of forensic interest, with special interest in DNA polymorphisms. Autosomal DNA polymorphisms, mini- and microsatellites (or short tandem repeats, STRs), single nucleotide polymorphisms (SNPs), X and Y chromosome polymorphisms, mtDNA polymorphisms, and any other type of DNA variation with potential forensic applications. Non-human DNA polymorphisms for crime scene investigation. Population genetics of human polymorphisms of forensic interest. Population data, especially from DNA polymorphisms of interest for the solution of forensic problems. DNA typing methodologies and strategies. Biostatistical methods in forensic genetics. Evaluation of DNA evidence in forensic problems (such as paternity or immigration cases, criminal casework, identification), classical and new statistical approaches. Standards in forensic genetics. Recommendations of regulatory bodies concerning methods, markers, interpretation or strategies or proposals for procedural or technical standards. Quality control. Quality control and quality assurance strategies, proficiency testing for DNA typing methodologies. Criminal DNA databases. Technical, legal and statistical issues. General ethical and legal issues related to forensic genetics.
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