K. V. Lavrov, E. G. Grechishnikova, A. O. Shemyakina, A. H. Bernal Mungarro, M. S. Potapova, D. D. Derbikov, A. S. Yanenko
{"title":"Fluorescence Reporters turboGFP and turboRFP for Promoter Evaluation in Escherichia coli: Possibilities and Limitations","authors":"K. V. Lavrov, E. G. Grechishnikova, A. O. Shemyakina, A. H. Bernal Mungarro, M. S. Potapova, D. D. Derbikov, A. S. Yanenko","doi":"10.1134/S0003683823090107","DOIUrl":null,"url":null,"abstract":"<p>Fluorescent proteins are convenient reporters widely used in cell biology. However, there is insufficient information at present on the possibilities and limitations of their use for the development and optimization of expression cassettes in the design of bacterial producers for biotechnology. Herein, the features of overexpression of genes of green (turboGFP) and red (turboRFP) fluorescent proteins in <i>Escherichia coli</i> under the control of the IPTG-regulated phage promoter T5 were investigated. Both proteins were mainly synthesized in the soluble form and had a significant cytotoxicity. In the presence of IPTG in the culture, overexpression of the turboGFP or turboRFP led to a delay in culture growth and the accumulation of clones that did not synthesize these proteins. Under the same cultivation conditions, the accumulation of such clones was more pronounced for turboRFP than for turboGFP. At a reduced expression level (in the absence of IPTG), these effects diminished (for turboRFP) or did not appear at all (for turboGFP). Possible reasons for the cytotoxicity of the studied proteins for <i>E. coli</i> cells were discussed. Practical recommendations for using the genes of investigated proteins as reporters in the development of expression cassettes were proposed. In particular, the level of production of the investigated proteins at which no negative effects were observed was determined, and the possibilities and limitations of the cytofluorometric cell sorting method in the development of strains-producers were indicated.</p>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"59 9","pages":"1168 - 1176"},"PeriodicalIF":1.0000,"publicationDate":"2024-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Applied Biochemistry and Microbiology","FirstCategoryId":"99","ListUrlMain":"https://link.springer.com/article/10.1134/S0003683823090107","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Fluorescent proteins are convenient reporters widely used in cell biology. However, there is insufficient information at present on the possibilities and limitations of their use for the development and optimization of expression cassettes in the design of bacterial producers for biotechnology. Herein, the features of overexpression of genes of green (turboGFP) and red (turboRFP) fluorescent proteins in Escherichia coli under the control of the IPTG-regulated phage promoter T5 were investigated. Both proteins were mainly synthesized in the soluble form and had a significant cytotoxicity. In the presence of IPTG in the culture, overexpression of the turboGFP or turboRFP led to a delay in culture growth and the accumulation of clones that did not synthesize these proteins. Under the same cultivation conditions, the accumulation of such clones was more pronounced for turboRFP than for turboGFP. At a reduced expression level (in the absence of IPTG), these effects diminished (for turboRFP) or did not appear at all (for turboGFP). Possible reasons for the cytotoxicity of the studied proteins for E. coli cells were discussed. Practical recommendations for using the genes of investigated proteins as reporters in the development of expression cassettes were proposed. In particular, the level of production of the investigated proteins at which no negative effects were observed was determined, and the possibilities and limitations of the cytofluorometric cell sorting method in the development of strains-producers were indicated.
期刊介绍:
Applied Biochemistry and Microbiology is an international peer reviewed journal that publishes original articles on biochemistry and microbiology that have or may have practical applications. The studies include: enzymes and mechanisms of enzymatic reactions, biosynthesis of low and high molecular physiologically active compounds; the studies of their structure and properties; biogenesis and pathways of their regulation; metabolism of producers of biologically active compounds, biocatalysis in organic synthesis, applied genetics of microorganisms, applied enzymology; protein and metabolic engineering, biochemical bases of phytoimmunity, applied aspects of biochemical and immunochemical analysis; biodegradation of xenobiotics; biosensors; biomedical research (without clinical studies). Along with experimental works, the journal publishes descriptions of novel research techniques and reviews on selected topics.