Functional and structural annotation of an uncharacterized protein A0A077Z4I5 from Trichuris trichiura

Q4 Biochemistry, Genetics and Molecular Biology
Kanchan Rauthan, Saranya Joshi, Lokesh Kumar, Sudhir Kumar
{"title":"Functional and structural annotation of an uncharacterized protein A0A077Z4I5 from Trichuris trichiura","authors":"Kanchan Rauthan, Saranya Joshi, Lokesh Kumar, Sudhir Kumar","doi":"10.51470/bca.2023.23.2.1253","DOIUrl":null,"url":null,"abstract":": Trichuris trichiura is a human parasite belonging to the nematode phylum. It has a genome of 75.2 Mb size that contains more than 9500 genes. Many of these are still uncharacterized proteins. Here, we have tried to annotate a protein bearing Uniprot accession id A0A077Z4I5 using various in silico tools. The amino acid sequence of this protein was subjected to various softwares which demonstrated it to be a Cysteine-knot protein. The motif search revealed the presence of this highly conserved domain, which is believed to be responsible for host parasite interaction and evasion of host immune system by the parasitic nematode. The report of this protein in human parasite T. trichiura is significant as it has not homolog in humans and can be a valid drug target.","PeriodicalId":38737,"journal":{"name":"Biochemical and Cellular Archives","volume":"40 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemical and Cellular Archives","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.51470/bca.2023.23.2.1253","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0

Abstract

: Trichuris trichiura is a human parasite belonging to the nematode phylum. It has a genome of 75.2 Mb size that contains more than 9500 genes. Many of these are still uncharacterized proteins. Here, we have tried to annotate a protein bearing Uniprot accession id A0A077Z4I5 using various in silico tools. The amino acid sequence of this protein was subjected to various softwares which demonstrated it to be a Cysteine-knot protein. The motif search revealed the presence of this highly conserved domain, which is believed to be responsible for host parasite interaction and evasion of host immune system by the parasitic nematode. The report of this protein in human parasite T. trichiura is significant as it has not homolog in humans and can be a valid drug target.
来自毛滴虫的未表征蛋白质 A0A077Z4I5 的功能和结构注释
:毛滴虫是一种人类寄生虫,属于线虫门。它的基因组大小为 75.2 Mb,包含 9500 多个基因。其中许多蛋白质仍未定性。在此,我们尝试使用各种硅学工具对 Uniprot 登录号为 A0A077Z4I5 的蛋白质进行注释。各种软件对该蛋白质的氨基酸序列进行了分析,结果表明它是一种半胱氨酸结蛋白。通过主题搜索发现了这一高度保守结构域的存在,据信这是寄生线虫与宿主寄生虫相互作用并逃避宿主免疫系统的原因。在人类寄生虫 T. trichiura 中发现这种蛋白质意义重大,因为它在人类中没有同源物,可以成为有效的药物靶标。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Biochemical and Cellular Archives
Biochemical and Cellular Archives Biochemistry, Genetics and Molecular Biology-Biochemistry
自引率
0.00%
发文量
4
期刊介绍: Biochemical and Cellular Archives – publishes original full length full length research papers, short communications and review articles in all areas of agricultural, biological and medical sciences. Emphasis will be given to manuscript which present novel finding pertinent to the biochemical basis of cellular structure and function as well as mechanism of cellular organelles. Investigations directed towards electron microscopy and localization of biomolecules in cells / tissues are particularly encouraged. The articles for the following broad areas of biological sciences will be considered for publications: ● Cellular Structure, Physiology and Biochemistry. ● Bacteriology, Virology and Toxicology. ● Light and electron microscopy and histochemistry. ● Immunology and molecular biology. ● Pathology.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信