Bioinformatic approach for repurposing immunomodulatory drugs for lepromatous leprosy.

IF 1.6 Q4 INFECTIOUS DISEASES
Gary J Espitia, Nelson Enrique Arenas, Luz Dary Gutiérrez-Castañeda, Martha Inírida Guerrero
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Abstract

Background: The lepromatous leprosy (LL) disease is caused by Mycobacterium leprae and Mycobacterium lepromatosis which is characterized by inadequate response to treatment, a propensity to drug resistance, and patient disability. We aimed to evaluate current immunomodulatory medicines and their target proteins collectively as a drug repurposing strategy to decipher novel uses for LL.

Methods: A dataset of human genes associated with LL-immune response was retrieved from public health genomic databases including the Human Genome Epidemiology Navigator and DisGeNET. Retrieved genes were filtered and enriched to set a robust network (≥10, up to 21 edges) and analyzed in the Cytoscape program (v3.9). Drug associations were obtained in the NDEx Integrated Query (v1.3.1) coupled with drug databases such as ChEMBL, BioGRID, and DrugBank. These networks were analyzed in Cytoscape with the CyNDEx-2 plugin and STRING protein network database.

Results: Pathways analyses resulted in 100 candidate drugs organized into pharmacological groups with similar targets and filtered on 54 different drugs. Gene-target network analysis showed that the main druggable targets associated with LL were tumoral necrosis factor-alpha, interleukin-1B, and interferon-gamma. Consistently, glucosamine, binimetinib, talmapimod, dilmapimod, andrographolide, and VX-702 might have a possible beneficial effect coupled with LL treatment.

Conclusion: Based on our drug repurposing analysis, immunomodulatory drugs might have a promising potential to be explored further as therapeutic options or to alleviate symptoms in LL patients.

用生物信息学方法重新确定麻风病免疫调节药物的用途。
背景:麻风病(Llepromatous Leprosy,LL)是由麻风分枝杆菌(Mycobacterium leprae)和麻风畸形分枝杆菌(Mycobacterium lepromatosis)引起的疾病,其特点是对治疗反应不充分、易产生耐药性和患者残疾。我们的目的是对目前的免疫调节药物及其靶蛋白进行综合评估,将其作为一种药物再利用战略,以破译 LL 的新用途:我们从公共卫生基因组数据库(包括人类基因组流行病学导航仪和 DisGeNET)中检索了与 LL 免疫反应相关的人类基因数据集。对检索到的基因进行筛选和富集,以建立一个稳健的网络(≥10,最多21条边),并在Cytoscape程序(v3.9)中进行分析。药物关联通过 NDEx 集成查询(v1.3.1)与 ChEMBL、BioGRID 和 DrugBank 等药物数据库结合获得。利用 CyNDEx-2 插件和 STRING 蛋白质网络数据库在 Cytoscape 中对这些网络进行了分析:通路分析结果显示,100 种候选药物组成了具有相似靶点的药理学组,并对 54 种不同药物进行了筛选。基因-靶点网络分析显示,与LL相关的主要药物靶点是肿瘤坏死因子-α、白细胞介素-1B和γ干扰素。一致的是,氨基葡萄糖、binimetinib、talmapimod、dilmapimod、穿心莲内酯和VX-702在LL治疗中可能会产生有益的效果:根据我们的药物再利用分析,免疫调节药物可能具有进一步开发的潜力,可作为治疗选择或缓解 LL 患者的症状。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
2.20
自引率
25.00%
发文量
62
审稿时长
7 weeks
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