{"title":"Segmentation of epithelial human type 2 cell images for the indirect immune fluorescence based on modified quantum entropy","authors":"Abu-Zinadah Hanaa, Abdel Azim Gamil","doi":"10.1186/s13640-021-00554-6","DOIUrl":null,"url":null,"abstract":"<p>The autoimmune disorders such as rheumatoid, arthritis, and scleroderma are connective tissue diseases (CTD). Autoimmune diseases are generally diagnosed using the antinuclear antibody (ANA) blood test. This test uses indirect immune fluorescence (IIf) image analysis to detect the presence of liquid substance antibodies at intervals the blood, which is responsible for CTDs. Typically human alveolar epithelial cells type 2 (HEp2) are utilized as the substrate for the microscope slides. The various fluorescence antibody patterns on HEp-2 cells permits the differential designation-diagnosis. The segmentation of HEp-2 cells of IIf images is therefore a crucial step in the ANA test. However, not only this task is extremely challenging, but physicians also often have a considerable number of IIf images to examine.In this study, we propose a new methodology for HEp2 segmentation from IIf images by maximum modified quantum entropy. Besides, we have used a new criterion with a flexible representation of the quantum image(FRQI). The proposed methodology determines the optimum threshold based on the quantum entropy measure, by maximizing the measure of class separability for the obtained classes over all the gray levels. We tested the suggested algorithm over all images of the MIVIA HEp 2 image data set.To objectively assess the proposed methodology, segmentation accuracy (SA), Jaccard similarity (JS), the F1-measure,the Matthews correlation coefficient(MCC), and the peak signal-to-noise ratio (PSNR) were used to evaluate performance. We have compared the proposed methodology with quantum entropy, Kapur and Otsu algorithms, respectively.The results show that the proposed algorithm is better than quantum entropy and Kapur methods. In addition, it overcomes the limitations of the Otsu method concerning the images which has positive skew histogram.This study can contribute to create a computer-aided decision (CAD) framework for the diagnosis of immune system diseases</p>","PeriodicalId":49322,"journal":{"name":"Eurasip Journal on Image and Video Processing","volume":"71 ","pages":""},"PeriodicalIF":2.4000,"publicationDate":"2021-04-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Eurasip Journal on Image and Video Processing","FirstCategoryId":"94","ListUrlMain":"https://doi.org/10.1186/s13640-021-00554-6","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2
Abstract
The autoimmune disorders such as rheumatoid, arthritis, and scleroderma are connective tissue diseases (CTD). Autoimmune diseases are generally diagnosed using the antinuclear antibody (ANA) blood test. This test uses indirect immune fluorescence (IIf) image analysis to detect the presence of liquid substance antibodies at intervals the blood, which is responsible for CTDs. Typically human alveolar epithelial cells type 2 (HEp2) are utilized as the substrate for the microscope slides. The various fluorescence antibody patterns on HEp-2 cells permits the differential designation-diagnosis. The segmentation of HEp-2 cells of IIf images is therefore a crucial step in the ANA test. However, not only this task is extremely challenging, but physicians also often have a considerable number of IIf images to examine.In this study, we propose a new methodology for HEp2 segmentation from IIf images by maximum modified quantum entropy. Besides, we have used a new criterion with a flexible representation of the quantum image(FRQI). The proposed methodology determines the optimum threshold based on the quantum entropy measure, by maximizing the measure of class separability for the obtained classes over all the gray levels. We tested the suggested algorithm over all images of the MIVIA HEp 2 image data set.To objectively assess the proposed methodology, segmentation accuracy (SA), Jaccard similarity (JS), the F1-measure,the Matthews correlation coefficient(MCC), and the peak signal-to-noise ratio (PSNR) were used to evaluate performance. We have compared the proposed methodology with quantum entropy, Kapur and Otsu algorithms, respectively.The results show that the proposed algorithm is better than quantum entropy and Kapur methods. In addition, it overcomes the limitations of the Otsu method concerning the images which has positive skew histogram.This study can contribute to create a computer-aided decision (CAD) framework for the diagnosis of immune system diseases
自身免疫性疾病如类风湿、关节炎和硬皮病是结缔组织疾病(CTD)。自身免疫性疾病的诊断通常使用抗核抗体(ANA)血液检查。该测试使用间接免疫荧光(IIf)图像分析来检测血液中液体物质抗体的存在,这是导致CTDs的原因。典型地,人肺泡上皮细胞2型(HEp2)被用作显微镜载玻片的底物。HEp-2细胞上的各种荧光抗体模式允许鉴别诊断。因此,IIf图像中HEp-2细胞的分割是ANA检测的关键步骤。然而,不仅这项任务极具挑战性,而且医生也经常有相当数量的IIf图像需要检查。在这项研究中,我们提出了一种利用最大修正量子熵从IIf图像中分割HEp2的新方法。此外,我们还采用了一种新的量子图像柔性表示准则(FRQI)。该方法通过在所有灰度级上最大化所获得的类的可分离性度量来确定基于量子熵度量的最佳阈值。我们在MIVIA HEp 2图像数据集的所有图像上测试了建议的算法。为了客观地评价所提出的方法,使用分割精度(SA)、Jaccard相似性(JS)、f1测度、Matthews相关系数(MCC)和峰值信噪比(PSNR)来评估性能。我们分别将所提出的方法与量子熵、Kapur和Otsu算法进行了比较。结果表明,该算法优于量子熵和Kapur方法。此外,它还克服了Otsu方法对具有正偏直方图的图像的局限性。本研究有助于建立免疫系统疾病诊断的计算机辅助决策(CAD)框架
期刊介绍:
EURASIP Journal on Image and Video Processing is intended for researchers from both academia and industry, who are active in the multidisciplinary field of image and video processing. The scope of the journal covers all theoretical and practical aspects of the domain, from basic research to development of application.