Categorization of Breast Carcinoma Histopathology Images by Utilizing Region-Based Convolutional Neural Networks

IF 2.6 4区 综合性期刊 Q2 MULTIDISCIPLINARY SCIENCES
Tuğçe Sena Altuntaş, Tuğba Toyran, Sami Arıca
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Abstract

The inadequacy of experienced pathologists worldwide, combined with the workload of current specialists, has increased the need for digital pathology. Accordingly, in this study, the categorization of breast cancer histopathology images supplied by ICIAR 2018 was carried out using region-based convolutional neural networks (R-CNN) based on transfer learning with custom augmentation, training parameters and patch size selection. The images were normalized using a stain normalization method to reduce inequalities in color distribution. Image patches were extracted, and a transfer learning technique was performed to solve the lack of data. ResNet-18 was utilized for transfer learning. Image augmentation was also performed to increase the training data. The network achieved a test accuracy of 93.75% and 97.06% for four classes and two classes, respectively, on the training dataset. The success of our method was also examined on the blind test set, and it had 73.44% accuracy for four classes and 87.24% accuracy for two classes in patch-wise classification, while it obtained 69.79% accuracy for four classes and 86.46% accuracy for two classes in image-wise classification. Our model achieved a score very close to the highest result in the literature, with a difference of 1.51% for two classes and 4.36% for four classes in patch-wise classification. The outcomes show that R-CNN with transfer learning gives competitive results with state-of-the-art studies in the literature in this dataset and can be used as a tool to aid pathologists.

Abstract Image

利用基于区域的卷积神经网络对乳腺癌组织病理学图像进行分类
全球经验丰富的病理学家不足,加上现有专家的工作量,增加了对数字病理学的需求。因此,在本研究中,利用基于迁移学习的区域卷积神经网络(R-CNN),通过自定义增强、训练参数和补丁大小选择,对 ICIAR 2018 提供的乳腺癌组织病理学图像进行了分类。使用染色归一化方法对图像进行归一化处理,以减少颜色分布的不平等。提取图像补丁后,采用迁移学习技术解决数据不足的问题。迁移学习使用的是 ResNet-18。此外,还进行了图像增强以增加训练数据。在训练数据集上,该网络对四个类别和两个类别的测试准确率分别达到了 93.75% 和 97.06%。在盲测试集上,我们的方法也取得了成功,在片段分类中,四类准确率为 73.44%,两类准确率为 87.24%;在图像分类中,四类准确率为 69.79%,两类准确率为 86.46%。我们的模型得分非常接近文献中的最高结果,在片断分类中,两类的差距为 1.51%,四类的差距为 4.36%。结果表明,在该数据集上,采用迁移学习的 R-CNN 与文献中最先进的研究结果相比具有竞争力,可用作辅助病理学家的工具。
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来源期刊
Arabian Journal for Science and Engineering
Arabian Journal for Science and Engineering MULTIDISCIPLINARY SCIENCES-
CiteScore
5.70
自引率
3.40%
发文量
993
期刊介绍: King Fahd University of Petroleum & Minerals (KFUPM) partnered with Springer to publish the Arabian Journal for Science and Engineering (AJSE). AJSE, which has been published by KFUPM since 1975, is a recognized national, regional and international journal that provides a great opportunity for the dissemination of research advances from the Kingdom of Saudi Arabia, MENA and the world.
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