DAVID H. MARGARIT, MARCELA V. REALE, ARIEL F. SCAGLIOTTI, LILIA M. ROMANELLI
{"title":"ABSORBING MARKOV CHAINS TO CHARACTERIZE AND PREDICT METASTASIS PATHWAYS IN CHILDHOOD CANCER","authors":"DAVID H. MARGARIT, MARCELA V. REALE, ARIEL F. SCAGLIOTTI, LILIA M. ROMANELLI","doi":"10.1142/s021833902350050x","DOIUrl":null,"url":null,"abstract":"Cancer and its metastasis in children have a high degree of lethality and side effects, so its characteristics need to be studied independently of adult cancer. The aim of this work is to model the metastasis pathways of the main childhood cancers worldwide by Absorbing Markov Chains, an important mathematical tool used for different applications in science. Statistical information was collected to detect the main affected organs (primary sites) and those where cancer cells generally spread and metastasize (secondary sites). Taking into account that it is a branching process, a directed graph was developed, and the associated transition matrices for the first and second metastases were constructed. Organs whose cancers generally remain encapsulated and do not spread their cancer cells are considered absorbing states in terms of Markov processes. For the selected organs, the probability of ending up in each of the absorption states according to the primary site was calculated, as well as the number of possible previous metastases until reaching one of these states. Although the lung in childhood cancer is not a characteristic primary site, it is one of the main sites of metastasis. Therefore, this work dedicates a section to including this organ as a site of possible metastasis.","PeriodicalId":54872,"journal":{"name":"Journal of Biological Systems","volume":null,"pages":null},"PeriodicalIF":1.3000,"publicationDate":"2023-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biological Systems","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1142/s021833902350050x","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Cancer and its metastasis in children have a high degree of lethality and side effects, so its characteristics need to be studied independently of adult cancer. The aim of this work is to model the metastasis pathways of the main childhood cancers worldwide by Absorbing Markov Chains, an important mathematical tool used for different applications in science. Statistical information was collected to detect the main affected organs (primary sites) and those where cancer cells generally spread and metastasize (secondary sites). Taking into account that it is a branching process, a directed graph was developed, and the associated transition matrices for the first and second metastases were constructed. Organs whose cancers generally remain encapsulated and do not spread their cancer cells are considered absorbing states in terms of Markov processes. For the selected organs, the probability of ending up in each of the absorption states according to the primary site was calculated, as well as the number of possible previous metastases until reaching one of these states. Although the lung in childhood cancer is not a characteristic primary site, it is one of the main sites of metastasis. Therefore, this work dedicates a section to including this organ as a site of possible metastasis.
期刊介绍:
The Journal of Biological Systems is published quarterly. The goal of the Journal is to promote interdisciplinary approaches in Biology and in Medicine, and the study of biological situations with a variety of tools, including mathematical and general systems methods. The Journal solicits original research papers and survey articles in areas that include (but are not limited to):
Complex systems studies; isomorphies; nonlinear dynamics; entropy; mathematical tools and systems theories with applications in Biology and Medicine.
Interdisciplinary approaches in Biology and Medicine; transfer of methods from one discipline to another; integration of biological levels, from atomic to molecular, macromolecular, cellular, and organic levels; animal biology; plant biology.
Environmental studies; relationships between individuals, populations, communities and ecosystems; bioeconomics, management of renewable resources; hierarchy theory; integration of spatial and time scales.
Evolutionary biology; co-evolutions; genetics and evolution; branching processes and phyllotaxis.
Medical systems; physiology; cardiac modeling; computer models in Medicine; cancer research; epidemiology.
Numerical simulations and computations; numerical study and analysis of biological data.
Epistemology; history of science.
The journal will also publish book reviews.